Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | EL305_RS03275 | Genome accession | NZ_LR134528 |
| Coordinates | 556128..556793 (+) | Length | 221 a.a. |
| NCBI ID | WP_002236888.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain NCTC12163 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 551128..561793
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL305_RS03240 (NCTC12163_00557) | - | 551145..551654 (+) | 510 | WP_002227434.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| EL305_RS03260 (NCTC12163_00558) | - | 553669..554256 (-) | 588 | WP_002236886.1 | superoxide dismutase | - |
| EL305_RS03270 (NCTC12163_00559) | dnaB | 554420..555826 (+) | 1407 | WP_002236887.1 | replicative DNA helicase | - |
| EL305_RS03275 (NCTC12163_00560) | pilH | 556128..556793 (+) | 666 | WP_002236888.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| EL305_RS03280 (NCTC12163_00561) | pilI | 556825..557436 (+) | 612 | WP_002236889.1 | type IV pilus modification protein PilV | Machinery gene |
| EL305_RS03285 (NCTC12163_00562) | pilJ | 557433..558374 (+) | 942 | WP_002236890.1 | PilW family protein | Machinery gene |
| EL305_RS03290 (NCTC12163_00563) | pilK | 558353..558952 (+) | 600 | WP_002236891.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| EL305_RS03295 (NCTC12163_00564) | pilX | 558957..559430 (+) | 474 | WP_002236892.1 | PilX family type IV pilin | Machinery gene |
Sequence
Protein
Download Length: 221 a.a. Molecular weight: 24469.00 Da Isoelectric Point: 9.7910
>NTDB_id=1124019 EL305_RS03275 WP_002236888.1 556128..556793(+) (pilH) [Neisseria meningitidis strain NCTC12163]
MCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASHAEQVANLLRFSRGEAVRLNLPVYICPVQVKKGGAPN
NKCDFGKNGQGMLAFGDKNGNKTYDGDTADVLLRSVVLNDDINNKRINYAFNHIAFGQTQPTADRVVWTFNQNGTFGYSS
DQNLKNNSKFVYSDGYIQIVLTDAKAVSADEKKFRSAVVLINSSGRVEVCPKNDTRAVCRH
MCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASHAEQVANLLRFSRGEAVRLNLPVYICPVQVKKGGAPN
NKCDFGKNGQGMLAFGDKNGNKTYDGDTADVLLRSVVLNDDINNKRINYAFNHIAFGQTQPTADRVVWTFNQNGTFGYSS
DQNLKNNSKFVYSDGYIQIVLTDAKAVSADEKKFRSAVVLINSSGRVEVCPKNDTRAVCRH
Nucleotide
Download Length: 666 bp
>NTDB_id=1124019 EL305_RS03275 WP_002236888.1 556128..556793(+) (pilH) [Neisseria meningitidis strain NCTC12163]
ATGTGTACACGAAAACAACAAGGTTTCACGCTAACAGAGCTGCTCATCGTGATGGTCATTGCAGCCATTATGGCGATGAT
AGCCCTCCCCAATATGAGCCAATGGATTGCATCCCGCCGCATTGCCAGTCACGCGGAGCAGGTTGCCAACCTTTTGCGTT
TCTCCAGGGGAGAAGCCGTCCGGCTCAATCTTCCTGTCTATATCTGTCCTGTTCAAGTTAAAAAAGGCGGTGCGCCCAAC
AATAAATGTGACTTCGGCAAGAATGGGCAGGGAATGTTGGCTTTTGGCGATAAGAATGGCAATAAGACATATGACGGCGA
TACGGCGGATGTTCTTCTCCGCAGTGTGGTATTGAATGATGATATCAATAATAAGCGGATTAATTATGCCTTCAACCATA
TCGCTTTCGGTCAGACTCAGCCGACCGCTGACCGTGTAGTTTGGACATTCAACCAAAACGGGACATTCGGCTATTCGTCC
GATCAGAATCTCAAGAATAATTCCAAATTTGTTTATTCTGACGGTTATATCCAAATCGTGTTGACAGATGCGAAGGCGGT
TTCTGCCGATGAAAAGAAATTCCGTTCGGCGGTGGTTTTGATTAACAGCAGCGGCAGGGTTGAAGTTTGTCCTAAAAACG
ATACGCGCGCCGTATGCCGACATTAA
ATGTGTACACGAAAACAACAAGGTTTCACGCTAACAGAGCTGCTCATCGTGATGGTCATTGCAGCCATTATGGCGATGAT
AGCCCTCCCCAATATGAGCCAATGGATTGCATCCCGCCGCATTGCCAGTCACGCGGAGCAGGTTGCCAACCTTTTGCGTT
TCTCCAGGGGAGAAGCCGTCCGGCTCAATCTTCCTGTCTATATCTGTCCTGTTCAAGTTAAAAAAGGCGGTGCGCCCAAC
AATAAATGTGACTTCGGCAAGAATGGGCAGGGAATGTTGGCTTTTGGCGATAAGAATGGCAATAAGACATATGACGGCGA
TACGGCGGATGTTCTTCTCCGCAGTGTGGTATTGAATGATGATATCAATAATAAGCGGATTAATTATGCCTTCAACCATA
TCGCTTTCGGTCAGACTCAGCCGACCGCTGACCGTGTAGTTTGGACATTCAACCAAAACGGGACATTCGGCTATTCGTCC
GATCAGAATCTCAAGAATAATTCCAAATTTGTTTATTCTGACGGTTATATCCAAATCGTGTTGACAGATGCGAAGGCGGT
TTCTGCCGATGAAAAGAAATTCCGTTCGGCGGTGGTTTTGATTAACAGCAGCGGCAGGGTTGAAGTTTGTCCTAAAAACG
ATACGCGCGCCGTATGCCGACATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Neisseria gonorrhoeae MS11 |
87.33 |
100 |
0.873 |