Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   EL310_RS03075 Genome accession   NZ_LR134522
Coordinates   525934..526548 (+) Length   204 a.a.
NCBI ID   WP_002222656.1    Uniprot ID   -
Organism   Neisseria meningitidis strain NCTC3372     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 520934..531548
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL310_RS03040 (NCTC3372_00538) - 521012..521521 (+) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -
  EL310_RS03055 (NCTC3372_00539) - 522771..523358 (-) 588 WP_002246908.1 superoxide dismutase -
  EL310_RS03065 (NCTC3372_00540) dnaB 523521..524927 (+) 1407 WP_002219448.1 replicative DNA helicase -
  EL310_RS03070 (NCTC3372_00541) pilH 525236..525904 (+) 669 WP_002246885.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  EL310_RS03075 (NCTC3372_00542) pilV 525934..526548 (+) 615 WP_002222656.1 type IV pilus modification protein PilV Machinery gene
  EL310_RS03080 (NCTC3372_00543) pilJ 526545..527486 (+) 942 WP_126375179.1 PilW family protein Machinery gene
  EL310_RS03085 (NCTC3372_00544) pilK 527465..528058 (+) 594 WP_002246881.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  EL310_RS03090 (NCTC3372_00545) pilX 528063..528536 (+) 474 WP_002246911.1 PilX family type IV pilin Machinery gene
  EL310_RS03105 (NCTC3372_00546) - 529900..530328 (-) 429 Protein_523 AzlC family ABC transporter permease -
  EL310_RS03110 (NCTC3372_00547) dut 530471..530923 (+) 453 WP_002226436.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 204 a.a.        Molecular weight: 22010.95 Da        Isoelectric Point: 4.9610

>NTDB_id=1123853 EL310_RS03075 WP_002222656.1 525934..526548(+) (pilV) [Neisseria meningitidis strain NCTC3372]
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNHHTLSAVDGDFAVDAVKSKKDLAKAQLDRFGYELKNALPDAAAIYYAICKDSLGVAPTLSAGSTFSSNCDASA
NGDTLIKVLWVNDSAGDSDIAHTNLETNGNNIVYTYQARVGGRE

Nucleotide


Download         Length: 615 bp        

>NTDB_id=1123853 EL310_RS03075 WP_002222656.1 525934..526548(+) (pilV) [Neisseria meningitidis strain NCTC3372]
ATGAAGAATAATGATTGCTTCCGCCTGAAAAACCCCCAGTCTGGTATGGCGCTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCACTATTGTCTGTTCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCAGAGACGCAAACCA
TCGTCAGTCAAATCACGCAAAACCTGATGGAGGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACCATCATACACTATCAGCTGTGGATGGCGATTTTGCGGTTGATGCCGTGAAAAGCAAGAA
GGATTTGGCAAAAGCCCAGTTGGACAGGTTCGGTTATGAATTGAAAAATGCCTTGCCGGATGCGGCAGCCATCTATTACG
CCATCTGCAAGGATTCGTTGGGTGTTGCGCCGACATTGTCCGCCGGTAGTACTTTTTCTTCAAATTGCGATGCTAGTGCA
AATGGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATCGCCCATACGAATCTTGAGAC
GAACGGCAACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGTGAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

87.923

100

0.892
  pilI Neisseria gonorrhoeae MS11

84.314

100

0.843
  pilV Neisseria gonorrhoeae MS11

84.314

100

0.843

Multiple sequence alignment