Detailed information NTG0112368

Bioinformatically predicted

Overview

• Name: comP
• Type: Machinery gene
• Locus tag: LA50_RS06840
• Genome accession: NZ_CP009418
• Coordinates: 1256835..1257284 (+)
• Length: 149 a.a.
• NCBI ID: WP_002221685.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain NM3686
• Function: DNA binding; DNA uptake; receptor of DNA uptake sequence (DUS) (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1251835..1262284

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LA50_RS06835 (LA50_07210)	comE	1256283..1256747 (+)	465	WP_011799029.1	helix-hairpin-helix domain-containing protein	Machinery gene
LA50_RS06840 (LA50_07215)	comP	1256835..1257284 (+)	450	WP_002221685.1	type IV pilin protein	Machinery gene
LA50_RS06845 (LA50_07220)	-	1257374..1257768 (-)	395	Protein_1293	5'-nucleotidase	-
LA50_RS12635	-	1257981..1258331 (+)	351	Protein_1294	IS5/IS1182 family transposase	-
LA50_RS06850 (LA50_07230)	-	1258357..1259322 (-)	966	WP_002216744.1	IS30-like element IS1655 family transposase	-
LA50_RS13965 (LA50_07235)	-	1259412..1259537 (+)	126	Protein_1296	IS5/IS1182 family transposase	-
LA50_RS06865 (LA50_07250)	-	1259943..1260998 (+)	1056	WP_002221681.1	DNA cytosine methyltransferase	-

Sequence

Protein

• Length: 149 a.a.
• Molecular weight: 16848.83 Da
• Isoelectric Point: 9.7951

>NTDB_id=112368 LA50_RS06840 WP_002221685.1 1256835..1257284(+) (comP) [Neisseria meningitidis strain NM3686]
MTDNRGFTLVELISVVLILSVLALIVYPSYRNYIEKAKINAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEG
FCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK

Nucleotide

• Length: 450 bp

>NTDB_id=112368 LA50_RS06840 WP_002221685.1 1256835..1257284(+) (comP) [Neisseria meningitidis strain NM3686]
ATGACTGATAATCGGGGGTTTACGCTGGTTGAATTAATATCAGTGGTCTTGATATTGTCTGTACTTGCTTTAATTGTTTA
TCCGAGCTATCGCAATTATATTGAGAAAGCAAAGATAAATGCAGTGCGGGCAGCCTTGTTAGAAAATGCACATTTTATGG
AAAAGTTTTATCTGCAGAATGGGAGATTTAAACAAACATCTACCAAATGGCCAAGTTTGCCGATTAAAGAGGCAGAAGGC
TTTTGTATCCGTTTGAATGGAATCGCGCGCGGGGCCTTAGACAGTAAATTCATGTTGAAGGCGGTAGCCATAGATAAAGA
TAAAAATCCTTTTATTATTAAGATGAATGAAAATCTAGTAACCTTTATTTGCAAGAAGTCCGCCAGTTCGTGTAGTGACG
GGCTGGATTATTTTAAAGGAAATGATAAGGACTGCAAGTTACTTAAGTAG

Domains

Predicted by InterProScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (28-107)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comP	Neisseria gonorrhoeae MS11	99.329	100	0.993
comP	Neisseria meningitidis 8013	98.658	100	0.987
comP	Neisseria subflava NJ9703	48.98	98.658	0.483