Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EL244_RS02760 | Genome accession | NZ_LR134396 |
| Coordinates | 613525..614064 (+) | Length | 179 a.a. |
| NCBI ID | WP_126458588.1 | Uniprot ID | - |
| Organism | Providencia rustigianii strain NCTC8113 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 608525..619064
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL244_RS02750 (NCTC8113_00561) | - | 609132..610328 (+) | 1197 | WP_126458582.1 | aromatic amino acid transaminase | - |
| EL244_RS02755 (NCTC8113_00562) | uvrA | 610388..613222 (-) | 2835 | WP_126458585.1 | excinuclease ABC subunit UvrA | - |
| EL244_RS02760 (NCTC8113_00563) | ssb | 613525..614064 (+) | 540 | WP_126458588.1 | single-stranded DNA-binding protein | Machinery gene |
| EL244_RS02765 | ivbL | 614330..614419 (+) | 90 | WP_112837526.1 | ilvB operon leader peptide IvbL | - |
| EL244_RS02770 (NCTC8113_00564) | ilvB | 614520..616217 (+) | 1698 | WP_126458591.1 | acetolactate synthase large subunit | - |
| EL244_RS02775 (NCTC8113_00565) | ilvN | 616220..616504 (+) | 285 | WP_126458594.1 | acetolactate synthase small subunit | - |
| EL244_RS02780 (NCTC8113_00566) | - | 616549..617106 (-) | 558 | WP_126458597.1 | helix-turn-helix domain-containing protein | - |
| EL244_RS02785 (NCTC8113_00567) | - | 617388..618584 (+) | 1197 | WP_006815958.1 | MFS transporter | - |
Sequence
Protein
Download Length: 179 a.a. Molecular weight: 19174.29 Da Isoelectric Point: 5.2630
>NTDB_id=1122745 EL244_RS02760 WP_126458588.1 613525..614064(+) (ssb) [Providencia rustigianii strain NCTC8113]
MASRGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQSGEMREKTEWHRVVIFGKLAEVAGEYLKKGSQVYI
EGSLQTRKWQDQSGQERYTTEVVVNIGGSMQMLGGRGGDAPSQGQGGQGGWGQPQQPAAAQQFSGGGAAPARTQAPARTQ
APAPQTNEPPMDFDDDIPF
MASRGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQSGEMREKTEWHRVVIFGKLAEVAGEYLKKGSQVYI
EGSLQTRKWQDQSGQERYTTEVVVNIGGSMQMLGGRGGDAPSQGQGGQGGWGQPQQPAAAQQFSGGGAAPARTQAPARTQ
APAPQTNEPPMDFDDDIPF
Nucleotide
Download Length: 540 bp
>NTDB_id=1122745 EL244_RS02760 WP_126458588.1 613525..614064(+) (ssb) [Providencia rustigianii strain NCTC8113]
ATGGCCAGCAGAGGCGTAAACAAAGTAATTCTTATCGGTAACCTAGGACAAGATCCAGAAATCCGTTATATGCCTAACGG
CGGAGCTGTAGCTAACCTGACTCTGGCGACTTCTGAAAGTTGGCGTGACAAGCAATCCGGTGAAATGCGTGAAAAAACAG
AATGGCACCGTGTTGTGATTTTCGGCAAATTAGCTGAAGTTGCCGGTGAATATCTGAAAAAGGGTTCACAAGTTTATATT
GAAGGTTCATTGCAAACACGTAAATGGCAAGACCAAAGCGGTCAAGAGCGCTATACCACCGAAGTTGTCGTTAACATCGG
CGGTTCAATGCAGATGCTGGGTGGTCGCGGTGGCGATGCGCCATCACAAGGTCAAGGTGGGCAAGGTGGTTGGGGTCAAC
CACAACAGCCAGCAGCGGCTCAACAGTTCAGTGGCGGCGGCGCAGCTCCTGCACGTACTCAAGCTCCTGCACGTACTCAA
GCTCCTGCACCTCAAACTAATGAACCACCAATGGATTTCGATGACGATATTCCGTTCTAA
ATGGCCAGCAGAGGCGTAAACAAAGTAATTCTTATCGGTAACCTAGGACAAGATCCAGAAATCCGTTATATGCCTAACGG
CGGAGCTGTAGCTAACCTGACTCTGGCGACTTCTGAAAGTTGGCGTGACAAGCAATCCGGTGAAATGCGTGAAAAAACAG
AATGGCACCGTGTTGTGATTTTCGGCAAATTAGCTGAAGTTGCCGGTGAATATCTGAAAAAGGGTTCACAAGTTTATATT
GAAGGTTCATTGCAAACACGTAAATGGCAAGACCAAAGCGGTCAAGAGCGCTATACCACCGAAGTTGTCGTTAACATCGG
CGGTTCAATGCAGATGCTGGGTGGTCGCGGTGGCGATGCGCCATCACAAGGTCAAGGTGGGCAAGGTGGTTGGGGTCAAC
CACAACAGCCAGCAGCGGCTCAACAGTTCAGTGGCGGCGGCGCAGCTCCTGCACGTACTCAAGCTCCTGCACGTACTCAA
GCTCCTGCACCTCAAACTAATGAACCACCAATGGATTTCGATGACGATATTCCGTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
69.892 |
100 |
0.726 |
| ssb | Glaesserella parasuis strain SC1401 |
55.556 |
100 |
0.587 |
| ssb | Neisseria meningitidis MC58 |
48.619 |
100 |
0.492 |
| ssb | Neisseria gonorrhoeae MS11 |
48.619 |
100 |
0.492 |