Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EL203_RS01400 | Genome accession | NZ_LR134383 |
| Coordinates | 302157..302624 (-) | Length | 155 a.a. |
| NCBI ID | WP_058471358.1 | Uniprot ID | A0A0W0VBV9 |
| Organism | Legionella jordanis strain NCTC11533 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 297157..307624
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL203_RS01365 | rpmJ | 298052..298165 (+) | 114 | WP_081778074.1 | 50S ribosomal protein L36 | - |
| EL203_RS01370 (NCTC11533_00280) | rpsM | 298245..298601 (+) | 357 | WP_058471364.1 | 30S ribosomal protein S13 | - |
| EL203_RS01375 (NCTC11533_00281) | rpsK | 298621..299019 (+) | 399 | WP_058471363.1 | 30S ribosomal protein S11 | - |
| EL203_RS01380 (NCTC11533_00282) | rpsD | 299035..299655 (+) | 621 | WP_058471362.1 | 30S ribosomal protein S4 | - |
| EL203_RS01385 (NCTC11533_00283) | - | 299673..300659 (+) | 987 | WP_058471361.1 | DNA-directed RNA polymerase subunit alpha | - |
| EL203_RS01390 (NCTC11533_00284) | rplQ | 300677..301060 (+) | 384 | WP_058471360.1 | 50S ribosomal protein L17 | - |
| EL203_RS01395 (NCTC11533_00285) | - | 301683..302066 (-) | 384 | WP_058471359.1 | hypothetical protein | - |
| EL203_RS01400 (NCTC11533_00286) | ssb | 302157..302624 (-) | 468 | WP_058471358.1 | single-stranded DNA-binding protein | Machinery gene |
| EL203_RS01405 (NCTC11533_00287) | - | 302717..304087 (-) | 1371 | WP_058471357.1 | MFS transporter | - |
| EL203_RS01410 (NCTC11533_00288) | fabL | 304232..304987 (+) | 756 | WP_058471356.1 | enoyl-[acyl-carrier-protein] reductase FabL | - |
| EL203_RS14545 (NCTC11533_00289) | - | 305094..306785 (-) | 1692 | WP_058471355.1 | glycoside hydrolase family 76 protein | - |
| EL203_RS01420 (NCTC11533_00290) | - | 307062..307475 (+) | 414 | WP_058472226.1 | acyl carrier protein | - |
Sequence
Protein
Download Length: 155 a.a. Molecular weight: 17344.41 Da Isoelectric Point: 4.8161
>NTDB_id=1122546 EL203_RS01400 WP_058471358.1 302157..302624(-) (ssb) [Legionella jordanis strain NCTC11533]
MARGINKVILIGNVGVDPDVRYMPNGNAVTTISLATSETWKDKQTGDKQERTEWHRVVCFNRLGEIAGEYVRKGSKLYVE
GSLRTRKWQDQQGQDRYTTEIVAADIQMLDGKSGSASYEDMPMANQQMPAQGSRKPQAMPAAQDAFDELDDDIPF
MARGINKVILIGNVGVDPDVRYMPNGNAVTTISLATSETWKDKQTGDKQERTEWHRVVCFNRLGEIAGEYVRKGSKLYVE
GSLRTRKWQDQQGQDRYTTEIVAADIQMLDGKSGSASYEDMPMANQQMPAQGSRKPQAMPAAQDAFDELDDDIPF
Nucleotide
Download Length: 468 bp
>NTDB_id=1122546 EL203_RS01400 WP_058471358.1 302157..302624(-) (ssb) [Legionella jordanis strain NCTC11533]
ATGGCACGTGGTATTAACAAAGTCATCTTAATAGGCAATGTGGGCGTGGATCCCGATGTGAGATACATGCCAAATGGCAA
TGCCGTCACCACGATATCGCTTGCAACCAGCGAGACATGGAAGGATAAACAAACGGGTGATAAACAAGAACGCACTGAAT
GGCATCGAGTAGTTTGCTTTAATCGCTTGGGTGAAATCGCAGGTGAATACGTGCGTAAAGGCTCTAAATTATACGTCGAA
GGCAGTTTGCGCACCCGTAAGTGGCAAGACCAACAAGGACAAGATCGCTACACCACCGAAATAGTTGCCGCAGACATTCA
AATGCTCGATGGCAAATCAGGCTCAGCAAGCTATGAGGATATGCCCATGGCGAACCAACAAATGCCAGCTCAAGGCAGCC
GAAAACCTCAAGCTATGCCAGCAGCACAAGATGCTTTTGATGAGCTCGACGACGACATTCCTTTTTAA
ATGGCACGTGGTATTAACAAAGTCATCTTAATAGGCAATGTGGGCGTGGATCCCGATGTGAGATACATGCCAAATGGCAA
TGCCGTCACCACGATATCGCTTGCAACCAGCGAGACATGGAAGGATAAACAAACGGGTGATAAACAAGAACGCACTGAAT
GGCATCGAGTAGTTTGCTTTAATCGCTTGGGTGAAATCGCAGGTGAATACGTGCGTAAAGGCTCTAAATTATACGTCGAA
GGCAGTTTGCGCACCCGTAAGTGGCAAGACCAACAAGGACAAGATCGCTACACCACCGAAATAGTTGCCGCAGACATTCA
AATGCTCGATGGCAAATCAGGCTCAGCAAGCTATGAGGATATGCCCATGGCGAACCAACAAATGCCAGCTCAAGGCAGCC
GAAAACCTCAAGCTATGCCAGCAGCACAAGATGCTTTTGATGAGCTCGACGACGACATTCCTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
50 |
100 |
0.574 |
| ssb | Vibrio cholerae strain A1552 |
49.714 |
100 |
0.561 |
| ssb | Neisseria meningitidis MC58 |
45.977 |
100 |
0.516 |
| ssb | Neisseria gonorrhoeae MS11 |
44.828 |
100 |
0.503 |