Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | EL148_RS01405 | Genome accession | NZ_LR134364 |
| Coordinates | 296242..297384 (-) | Length | 380 a.a. |
| NCBI ID | WP_064082414.1 | Uniprot ID | - |
| Organism | [Haemophilus] ducreyi strain NCTC11483 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 291242..302384
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL148_RS01380 (NCTC11483_00289) | rplA | 291537..292226 (-) | 690 | WP_010945641.1 | 50S ribosomal protein L1 | - |
| EL148_RS01385 (NCTC11483_00290) | rplK | 292231..292659 (-) | 429 | WP_005599211.1 | 50S ribosomal protein L11 | - |
| EL148_RS01390 (NCTC11483_00291) | nusG | 292847..293410 (-) | 564 | WP_064082412.1 | transcription termination/antitermination protein NusG | - |
| EL148_RS01395 (NCTC11483_00292) | secE | 293412..293828 (-) | 417 | WP_064082413.1 | preprotein translocase subunit SecE | - |
| EL148_RS01400 (NCTC11483_00294) | - | 294122..296132 (+) | 2011 | Protein_258 | OPT family oligopeptide transporter | - |
| EL148_RS01405 (NCTC11483_00295) | dprA | 296242..297384 (-) | 1143 | WP_064082414.1 | DNA-processing protein DprA | Machinery gene |
| EL148_RS01410 (NCTC11483_00296) | def | 297573..298088 (+) | 516 | WP_064082415.1 | peptide deformylase | - |
| EL148_RS01415 (NCTC11483_00297) | rfaD | 298218..299159 (+) | 942 | WP_064082416.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| EL148_RS01420 (NCTC11483_00298) | - | 299256..299588 (-) | 333 | WP_064082417.1 | DMT family transporter | - |
| EL148_RS01425 (NCTC11483_00300) | - | 300044..300334 (-) | 291 | WP_064082418.1 | YfcZ/YiiS family protein | - |
| EL148_RS01430 (NCTC11483_00301) | - | 300466..300951 (-) | 486 | WP_074647999.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 380 a.a. Molecular weight: 42088.55 Da Isoelectric Point: 5.6909
>NTDB_id=1122289 EL148_RS01405 WP_064082414.1 296242..297384(-) (dprA) [[Haemophilus] ducreyi strain NCTC11483]
MKQLALLKLLQIPQLGPQRIARLLNQIDFAEFCQYSKTELQQMGWNDKQIQCWFQPEMRWIDRAITWAEQPNQRLVTLFD
KDYPFLLQQISTAPLLLFVRGSVASLTLLQIAIVGSRDYSPYGEYWASYFTRELIEQGFAVTSGLAIGIDGFCHQQAVKQ
QAVTIAVLGSGLDQVYPARHKKLAEQIIANGGALVSEFFPDQPPLAEHFPRRNRIISGLSLGTLVVEATINSGSLITARY
ALEQGREVFALPNTAQNPYAAGCHQLIKEGAILTESIADILQAIQHQYRPSAKLVNANSVNNSPNIANQQLTIPLTDKTL
PDLTACQQQIMQNISFTPIAIDDLAKATDIAVEILLVELLGLELLGMIKQVCGGYVVTQA
MKQLALLKLLQIPQLGPQRIARLLNQIDFAEFCQYSKTELQQMGWNDKQIQCWFQPEMRWIDRAITWAEQPNQRLVTLFD
KDYPFLLQQISTAPLLLFVRGSVASLTLLQIAIVGSRDYSPYGEYWASYFTRELIEQGFAVTSGLAIGIDGFCHQQAVKQ
QAVTIAVLGSGLDQVYPARHKKLAEQIIANGGALVSEFFPDQPPLAEHFPRRNRIISGLSLGTLVVEATINSGSLITARY
ALEQGREVFALPNTAQNPYAAGCHQLIKEGAILTESIADILQAIQHQYRPSAKLVNANSVNNSPNIANQQLTIPLTDKTL
PDLTACQQQIMQNISFTPIAIDDLAKATDIAVEILLVELLGLELLGMIKQVCGGYVVTQA
Nucleotide
Download Length: 1143 bp
>NTDB_id=1122289 EL148_RS01405 WP_064082414.1 296242..297384(-) (dprA) [[Haemophilus] ducreyi strain NCTC11483]
ATGAAACAATTGGCATTACTTAAATTATTGCAGATTCCACAACTAGGCCCACAGCGGATTGCACGTTTATTAAATCAAAT
TGATTTTGCTGAATTTTGTCAATATAGCAAAACAGAACTACAGCAAATGGGATGGAATGACAAACAAATTCAATGTTGGT
TTCAGCCTGAAATGCGTTGGATTGATCGGGCAATAACTTGGGCAGAACAGCCAAATCAACGGCTTGTGACACTGTTTGAT
AAAGATTATCCCTTTTTATTACAGCAAATTAGCACTGCACCACTATTATTATTTGTGCGTGGTTCGGTGGCTAGCTTAAC
TCTGCTACAAATTGCGATTGTTGGCAGTCGTGATTATTCTCCTTATGGAGAGTATTGGGCCTCTTATTTTACACGCGAAT
TAATTGAGCAAGGTTTTGCGGTAACAAGTGGCTTGGCGATTGGCATTGATGGTTTTTGTCATCAACAAGCAGTAAAACAG
CAAGCGGTGACTATTGCTGTATTAGGTAGCGGTTTAGATCAAGTTTATCCCGCACGTCATAAAAAATTAGCAGAACAAAT
TATTGCGAATGGTGGAGCATTAGTGTCAGAGTTTTTTCCCGATCAACCCCCGCTAGCGGAACATTTTCCTCGTCGAAATC
GTATTATTAGTGGCTTGTCACTTGGTACTTTAGTGGTAGAAGCAACGATTAATAGTGGCTCATTAATTACCGCACGCTAT
GCTTTAGAGCAAGGGCGAGAGGTCTTTGCTTTGCCGAATACTGCACAAAATCCTTATGCAGCAGGTTGCCATCAATTGAT
TAAGGAAGGCGCTATTTTAACCGAATCGATAGCGGATATTTTACAAGCGATTCAGCATCAATATCGACCATCAGCTAAGC
TAGTTAATGCAAATAGCGTGAATAATTCCCCTAATATTGCTAATCAGCAATTGACAATACCGTTAACGGATAAAACATTG
CCGGATTTGACCGCTTGTCAGCAACAGATTATGCAAAATATCAGTTTTACGCCGATTGCAATAGATGATTTAGCTAAAGC
AACGGATATAGCGGTCGAAATATTATTAGTTGAGCTACTTGGTTTAGAATTATTAGGTATGATTAAACAGGTTTGTGGGG
GATATGTAGTGACACAGGCATAA
ATGAAACAATTGGCATTACTTAAATTATTGCAGATTCCACAACTAGGCCCACAGCGGATTGCACGTTTATTAAATCAAAT
TGATTTTGCTGAATTTTGTCAATATAGCAAAACAGAACTACAGCAAATGGGATGGAATGACAAACAAATTCAATGTTGGT
TTCAGCCTGAAATGCGTTGGATTGATCGGGCAATAACTTGGGCAGAACAGCCAAATCAACGGCTTGTGACACTGTTTGAT
AAAGATTATCCCTTTTTATTACAGCAAATTAGCACTGCACCACTATTATTATTTGTGCGTGGTTCGGTGGCTAGCTTAAC
TCTGCTACAAATTGCGATTGTTGGCAGTCGTGATTATTCTCCTTATGGAGAGTATTGGGCCTCTTATTTTACACGCGAAT
TAATTGAGCAAGGTTTTGCGGTAACAAGTGGCTTGGCGATTGGCATTGATGGTTTTTGTCATCAACAAGCAGTAAAACAG
CAAGCGGTGACTATTGCTGTATTAGGTAGCGGTTTAGATCAAGTTTATCCCGCACGTCATAAAAAATTAGCAGAACAAAT
TATTGCGAATGGTGGAGCATTAGTGTCAGAGTTTTTTCCCGATCAACCCCCGCTAGCGGAACATTTTCCTCGTCGAAATC
GTATTATTAGTGGCTTGTCACTTGGTACTTTAGTGGTAGAAGCAACGATTAATAGTGGCTCATTAATTACCGCACGCTAT
GCTTTAGAGCAAGGGCGAGAGGTCTTTGCTTTGCCGAATACTGCACAAAATCCTTATGCAGCAGGTTGCCATCAATTGAT
TAAGGAAGGCGCTATTTTAACCGAATCGATAGCGGATATTTTACAAGCGATTCAGCATCAATATCGACCATCAGCTAAGC
TAGTTAATGCAAATAGCGTGAATAATTCCCCTAATATTGCTAATCAGCAATTGACAATACCGTTAACGGATAAAACATTG
CCGGATTTGACCGCTTGTCAGCAACAGATTATGCAAAATATCAGTTTTACGCCGATTGCAATAGATGATTTAGCTAAAGC
AACGGATATAGCGGTCGAAATATTATTAGTTGAGCTACTTGGTTTAGAATTATTAGGTATGATTAAACAGGTTTGTGGGG
GATATGTAGTGACACAGGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Glaesserella parasuis strain SC1401 |
68.633 |
98.158 |
0.674 |
| dprA | Haemophilus influenzae Rd KW20 |
49.708 |
90 |
0.447 |
| dprA | Vibrio campbellii strain DS40M4 |
45.308 |
98.158 |
0.445 |
| dprA | Vibrio cholerae strain A1552 |
41.867 |
98.684 |
0.413 |
| dprA | Legionella pneumophila strain ERS1305867 |
38.298 |
98.947 |
0.379 |