Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | EL147_RS07415 | Genome accession | NZ_LR134341 |
| Coordinates | 1515433..1515924 (+) | Length | 163 a.a. |
| NCBI ID | WP_007892149.1 | Uniprot ID | A0A4U9Y9J5 |
| Organism | Streptococcus pseudoporcinus strain NCTC13786 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1510433..1520924
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL147_RS07390 (NCTC13786_01485) | trxA | 1512141..1512455 (+) | 315 | WP_007892545.1 | thioredoxin | - |
| EL147_RS07395 (NCTC13786_01486) | tnpA | 1512640..1513095 (+) | 456 | WP_007896461.1 | IS200/IS605 family transposase | - |
| EL147_RS07405 (NCTC13786_01487) | mutY | 1513319..1514461 (-) | 1143 | WP_007892115.1 | A/G-specific adenine glycosylase | - |
| EL147_RS07410 (NCTC13786_01488) | rpsF | 1515119..1515409 (+) | 291 | WP_003084800.1 | 30S ribosomal protein S6 | - |
| EL147_RS07415 (NCTC13786_01489) | ssbA | 1515433..1515924 (+) | 492 | WP_007892149.1 | single-stranded DNA-binding protein | Machinery gene |
| EL147_RS07420 (NCTC13786_01490) | rpsR | 1516066..1516305 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| EL147_RS07425 (NCTC13786_01491) | - | 1516720..1517388 (-) | 669 | WP_007892078.1 | DUF1129 domain-containing protein | - |
| EL147_RS07430 (NCTC13786_01492) | - | 1517511..1518455 (-) | 945 | WP_007892119.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18156.90 Da Isoelectric Point: 4.9119
>NTDB_id=1122020 EL147_RS07415 WP_007892149.1 1515433..1515924(+) (ssbA) [Streptococcus pseudoporcinus strain NCTC13786]
MINNVVLVGRMTKDAELRYTPNQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSSNSYNSGGFNNTSTNNNYSASSQQTPNFGRDESPFGNSNPMEISDDD
LPF
MINNVVLVGRMTKDAELRYTPNQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSSNSYNSGGFNNTSTNNNYSASSQQTPNFGRDESPFGNSNPMEISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=1122020 EL147_RS07415 WP_007892149.1 1515433..1515924(+) (ssbA) [Streptococcus pseudoporcinus strain NCTC13786]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAAGATGCAGAGCTCCGTTATACACCAAACCAGGTAGCAGTTGC
TACTTTTACCCTTGCTGTAAATCGCACTTTTAAGAGCCAAAATGGGGAGCGTGAAGCGGATTTCATTAACTGTGTTATCT
GGCGCCAACCTGCTGAAAATTTAGCAAATTGGGCAAAAAAGGGTGCTTTAATCGGAATTACTGGTCGTATTCAGACTCGT
AATTATGAAAATCAACAAGGACAACGTGTTTACGTAACGGAAGTGGTTGCGGATAATTTCCAAATGTTGGAAAGCCGTGC
TACACGTGAAGGTGGCTCATCTAATTCTTATAATAGTGGTGGTTTTAATAACACCTCAACTAATAATAATTATTCAGCTT
CTTCTCAACAAACACCTAACTTTGGTCGAGACGAAAGTCCATTTGGTAATTCAAACCCAATGGAAATTTCAGACGACGAT
CTACCATTCTAA
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAAGATGCAGAGCTCCGTTATACACCAAACCAGGTAGCAGTTGC
TACTTTTACCCTTGCTGTAAATCGCACTTTTAAGAGCCAAAATGGGGAGCGTGAAGCGGATTTCATTAACTGTGTTATCT
GGCGCCAACCTGCTGAAAATTTAGCAAATTGGGCAAAAAAGGGTGCTTTAATCGGAATTACTGGTCGTATTCAGACTCGT
AATTATGAAAATCAACAAGGACAACGTGTTTACGTAACGGAAGTGGTTGCGGATAATTTCCAAATGTTGGAAAGCCGTGC
TACACGTGAAGGTGGCTCATCTAATTCTTATAATAGTGGTGGTTTTAATAACACCTCAACTAATAATAATTATTCAGCTT
CTTCTCAACAAACACCTAACTTTGGTCGAGACGAAAGTCCATTTGGTAATTCAAACCCAATGGAAATTTCAGACGACGAT
CTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
58.382 |
100 |
0.62 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.721 |
100 |
0.62 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
65.031 |
0.368 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |