Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EL133_RS07635 Genome accession   NZ_LR134323
Coordinates   1494644..1495453 (-) Length   269 a.a.
NCBI ID   WP_006739451.1    Uniprot ID   G5KIB0
Organism   Streptococcus urinalis strain NCTC13766     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1489644..1500453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL133_RS07625 (NCTC13766_01582) smc 1490274..1493831 (-) 3558 WP_006738577.1 chromosome segregation protein SMC -
  EL133_RS07630 (NCTC13766_01583) rnc 1493839..1494525 (-) 687 WP_006738912.1 ribonuclease III -
  EL133_RS07635 (NCTC13766_01584) vicX 1494644..1495453 (-) 810 WP_006739451.1 MBL fold metallo-hydrolase Regulator
  EL133_RS07640 (NCTC13766_01585) vicK 1495457..1496806 (-) 1350 WP_006738842.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EL133_RS07645 (NCTC13766_01586) vicR 1496799..1497509 (-) 711 WP_006740362.1 response regulator YycF Regulator
  EL133_RS07650 (NCTC13766_01587) - 1497816..1498601 (+) 786 WP_006740230.1 amino acid ABC transporter ATP-binding protein -
  EL133_RS07655 (NCTC13766_01588) - 1498611..1499360 (+) 750 WP_006740471.1 transporter substrate-binding domain-containing protein -
  EL133_RS07660 (NCTC13766_01589) - 1499458..1500153 (+) 696 WP_006739051.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30191.20 Da        Isoelectric Point: 6.1169

>NTDB_id=1121539 EL133_RS07635 WP_006739451.1 1494644..1495453(-) (vicX) [Streptococcus urinalis strain NCTC13766]
MSTNGFKYSILASGSTGNSFYLETPKKRLLIDAGLTGKKVTSLLAEIDRKPEDLDAILITHEHSDHIKGVGVLARKYHLD
IYANEKTWQVIDDCNMIGKIDSSQKHVFQRGKMITFGDIDIESFGVSHDAIDPQFYRFMKDNKSFVMLTDTGYVSDRMSG
IIQNADGYLIESNHDVEILRAGSYPWNLKQRILSDRGHLSNEDGADTMIRTLGNKTKKIYLGHLSKENNIKELAHMTMEN
QLMQADLGVGHDFQVCDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1121539 EL133_RS07635 WP_006739451.1 1494644..1495453(-) (vicX) [Streptococcus urinalis strain NCTC13766]
ATGTCAACAAATGGATTTAAATACAGTATATTAGCATCAGGATCCACTGGAAATAGCTTTTATCTGGAGACGCCTAAAAA
GCGTCTTTTAATTGATGCTGGTTTAACTGGAAAAAAAGTAACCAGTTTATTAGCAGAAATTGATCGCAAACCTGAAGACC
TTGATGCTATTTTAATTACACACGAACATTCAGACCATATCAAAGGTGTAGGTGTTTTAGCTAGAAAATATCATCTTGAT
ATCTATGCCAATGAAAAGACTTGGCAAGTGATCGATGACTGTAATATGATTGGAAAGATTGATAGTAGTCAAAAGCATGT
CTTTCAAAGAGGAAAAATGATAACTTTTGGAGATATTGATATTGAAAGCTTTGGTGTTAGCCATGATGCCATAGATCCTC
AATTTTATCGCTTTATGAAAGATAATAAAAGTTTTGTGATGCTAACAGATACTGGATATGTCAGTGATCGTATGTCTGGT
ATTATTCAAAATGCAGATGGTTATCTCATTGAGTCAAATCATGATGTTGAAATTTTAAGGGCAGGTAGCTATCCATGGAA
TTTGAAACAACGCATATTATCAGATCGTGGACATCTTTCAAATGAAGATGGTGCAGATACAATGATTCGTACTTTGGGTA
ATAAAACCAAAAAAATTTACCTAGGGCATTTAAGTAAAGAAAATAATATTAAAGAATTAGCGCATATGACTATGGAAAAT
CAATTAATGCAAGCAGATTTAGGTGTGGGTCATGATTTTCAAGTTTGTGACACGTCGCCAGATACTGCTTGTCCACTAAC
AGATATTTAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5KIB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.695

100

0.777

Multiple sequence alignment