Detailed information NTG1121369

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: EL233_RS17875
• Genome accession: NZ_LR134319
• Coordinates: 3802985..3804049 (-)
• Length: 354 a.a.
• NCBI ID: WP_126526953.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain NCTC10450
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3797985..3809049

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL233_RS17850 (NCTC10450_03598)	aroK	3798564..3799109 (-)	546	WP_126526949.1	shikimate kinase AroK	-
EL233_RS17855 (NCTC10450_03599)	pilQ	3799116..3801215 (-)	2100	WP_126526950.1	type IV pilus secretin PilQ	Machinery gene
EL233_RS17860 (NCTC10450_03600)	pilP	3801269..3801796 (-)	528	WP_126526951.1	type 4a pilus biogenesis lipoprotein PilP	-
EL233_RS17865 (NCTC10450_03601)	pilO	3801793..3802416 (-)	624	WP_019405681.1	type 4a pilus biogenesis protein PilO	-
EL233_RS17870 (NCTC10450_03602)	-	3802413..3802985 (-)	573	WP_126526952.1	PilN domain-containing protein	-
EL233_RS17875 (NCTC10450_03603)	comM	3802985..3804049 (-)	1065	WP_126526953.1	pilus assembly protein PilM	Machinery gene
EL233_RS17880 (NCTC10450_03604)	-	3804229..3806652 (+)	2424	WP_045159369.1	penicillin-binding protein 1A	-
EL233_RS17885 (NCTC10450_03605)	-	3806717..3807985 (-)	1269	WP_011911783.1	malic enzyme-like NAD(P)-binding protein	-
EL233_RS17890 (NCTC10450_03606)	-	3808127..3808921 (-)	795	WP_126526954.1	thermonuclease family protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37774.31 Da
• Isoelectric Point: 4.6880

>NTDB_id=1121369 EL233_RS17875 WP_126526953.1 3802985..3804049(-) (comM) [Stutzerimonas stutzeri strain NCTC10450]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVAKAKTGCKSAVV
AVSGSAVITKMIEMDAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRAPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLASQLGTAHGELTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDSEVLLPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPGLDHMIQQKIGTQTLVANP
FADMALSSKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1121369 EL233_RS17875 WP_126526953.1 3802985..3804049(-) (comM) [Stutzerimonas stutzeri strain NCTC10450]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGATATCAGTTCGACCTCAGTCAAGCTCCTCGAATT
AAGTCGATCGGGTAATCGGTACCGCGTCGAGGCTTATGCCGTCGAGCCGCTGCCACCGAATGCCGTCGTCGAAAAGAACA
TCGCCGAACTTGAGGGTGTCGGTCAGGCCCTGCAGCGAGTCGTTGCCAAGGCCAAGACCGGCTGCAAGTCCGCTGTTGTC
GCTGTCTCCGGGTCTGCCGTCATCACAAAGATGATCGAGATGGATGCCGGGCTTTCTGATGAAGAGCTCGAGAACCAGCT
CAAGATCGAGGCAGATCAGTACATCCCCTACCCACTGGAGGAAGTCGCGATCGACTTCGAGGTGCAAGGTCCTGCGCCTC
GCGCGCCTGGCAGGGTAGAGGTTCTCCTCGCCGCTTGCCGTAAAGAGAATGTCGAGATCCGTGAAGCCGCGCTGGCCTTG
GCCGGGCTTACCGCCAAAGTGGTGGATGTCGAGGCCTATGCGCTTGAGCGCTCCTATGGGTTGCTCGCTTCACAGCTGGG
TACAGCGCACGGCGAGCTGACCGTTGCCGTCGTCGATATCGGCGCGACCATGACAACCCTGAGCGTGCTGCATAACGGGC
GTACCATCTACACGCGCGAGCAGCTGTTCGGTGGTCGCCAACTGACCGAAGAGATCCAGCGCCGCTACGGTCTGTCTCAG
GAAGAAGCCGGCCTTGCCAAGAAGCAAGGCGGTCTCCCAGATGACTACGACAGTGAAGTCCTGCTTCCGTTCAAGGAGGC
GGTGGTGCAGCAGGTATCCCGCTCGTTGCAGTTCTTCTTCGCTGCAGGGCAGTTCCACGACGTCGACTGCATCCTGCTCG
CGGGCGGGACGGCCTCCATTCCAGGTCTCGATCACATGATTCAGCAAAAGATCGGAACGCAAACTCTAGTGGCTAATCCT
TTTGCCGATATGGCTTTGAGCAGCAAGGTGAACGCCGGGGCGCTGGCCAGTGATGCGCCTGCGTTAATGATTGCATGCGG
TTTGGCGCTGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	55.932	100	0.559
pilM	Acinetobacter baumannii D1279779	55.932	100	0.559
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.328	100	0.463