Detailed information NTG1121346

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: EL233_RS03185
• Genome accession: NZ_LR134319
• Coordinates: 718258..719595 (-)
• Length: 445 a.a.
• NCBI ID: WP_026006503.1
• Uniprot ID: A0A137YGV3
• Organism: Stutzerimonas stutzeri strain NCTC10450
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 713258..724595

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL233_RS03175 (NCTC10450_00641)	-	715343..716938 (-)	1596	WP_125865873.1	response regulator	-
EL233_RS03180 (NCTC10450_00642)	-	717156..718214 (+)	1059	WP_011914666.1	DUF2333 family protein	-
EL233_RS03185 (NCTC10450_00643)	pilR	718258..719595 (-)	1338	WP_026006503.1	sigma-54-dependent transcriptional regulator	Regulator
EL233_RS03190 (NCTC10450_00644)	pilS	719726..721318 (-)	1593	WP_013984075.1	sensor histidine kinase	Regulator
EL233_RS03195 (NCTC10450_00645)	-	721308..721541 (-)	234	WP_126525955.1	PP0621 family protein	-
EL233_RS03200 (NCTC10450_00646)	-	721663..722652 (-)	990	WP_013984073.1	outer membrane protein assembly factor BamD	-
EL233_RS03205 (NCTC10450_00648)	rluD	722857..723831 (+)	975	WP_011914661.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
EL233_RS03210 (NCTC10450_00649)	pgeF	723828..724565 (+)	738	WP_126525957.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49558.09 Da
• Isoelectric Point: 6.4140

>NTDB_id=1121346 EL233_RS03185 WP_026006503.1 718258..719595(-) (pilR) [Stutzerimonas stutzeri strain NCTC10450]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGSGLELVQHIQQQYPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAEAPVDSRLLGSSPPMKTLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADVM
LRRLAQECGEATARLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSPGLPENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=1121346 EL233_RS03185 WP_026006503.1 718258..719595(-) (pilR) [Stutzerimonas stutzeri strain NCTC10450]
ATGACCGCGCGCCAGAAAGCCCTGATCATCGACGACGAGCCGGACATCCGCGAGCTGCTGGAGATCACCCTCGGCCGCAT
GAAGCTCGATACCCGCAGCGCACGCAACCTCAAGGAGGCGCGCGAGCTGCTGGCACGCGAGCACTACGACCTGTGCCTGA
CCGATATGCGCCTGCCCGACGGCAGTGGCCTTGAGCTGGTCCAGCACATCCAGCAACAGTACCCGCAACTGCCCGTGGCG
ATGATCACCGCCTATGGCAGCCTGGATACCGCCATCGGCGCACTCAAGGCCGGTGCGTTCGACTTTCTCACCAAACCGGT
GGACCTGAACCGCCTGCGCGAGCTGGTCAGTACCGCCCTGCGCCTGCGCGCGCCCGCAGCCGAAGCGCCGGTGGACAGTC
GCCTGCTGGGCAGCTCGCCGCCGATGAAAACCTTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGCCAGGCACCCGTCTAC
ATCAGCGGCGAGTCGGGCAGCGGCAAGGAACTGGTGGCACGCCTGATTCATGAGCAGGGCCCGCGCAGCGAAAAGCCATT
CGTGCCGGTCAACTGCGGTGCCATTCCGTCGGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGGGCAGCTTCAGCG
GCGCCATCGAGGACAAGCCCGGCCTGTTCCAGGCCGCGAACGGTGGCACGCTGTTTCTCGACGAGGTGGCGGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCCATCCAGGAAAAGGCCGTGCGTGCCGTTGGCGGTGCGCAGGAAGTGATGGT
CGATGTACGCATCCTTTGTGCCACCCACAAGGATCTCGCCAGCGAGGTCGCCGCAGGCCGTTTTCGCCAGGATCTCTACT
ACCGCCTGAATGTCATCGAACTGCGTGTACCGCCACTACGCGAACGCCGGGAAGACATCGGCCTGCTCGCCGATGTCATG
CTGCGCCGTCTGGCGCAGGAATGCGGCGAGGCCACGGCCCGCCTGCATCCCGATGCCCTGGCCAAGCTGGAGAACTATCG
CTTTCCGGGCAACGTCCGCGAGCTGGAGAACATGCTCGAACGCGCCTACACCCTGTGCGAAGGCGACGAGATCAAGGCTG
GCGACCTGCGCCTGGCGGATAGCCCCGGCCTGCCGGAAAACGGCGAAGCCAGCCTGGCGCAGATCGACAACCTGGAGGAC
CACCTGGAGGAGATCGAGCGCAAGCTGATCATGCAGGCCCTCGAAGAAACACGCTGGAACCGCACCGCGGCCGCCCAACG
ACTGGGGCTGACCTTCCGCTCGATGCGTTACCGTCTGAAGAAACTCGGACTGGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

3D structure

• AlphaFold DB: A0A137YGV3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.586	99.775	0.854
pilR	Acinetobacter baumannii strain A118	50.545	100	0.521
luxO	Vibrio cholerae strain A1552	38.117	100	0.382