Detailed information NTG1120737

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: EL200_RS20825
• Genome accession: NZ_LR134301
• Coordinates: 4476360..4477418 (+)
• Length: 352 a.a.
• NCBI ID: WP_010484061.1
• Uniprot ID: A0A0L8AA94
• Organism: Stenotrophomonas maltophilia strain NCTC13014
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4471360..4482418

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL200_RS20810 (NCTC13014_04147)	-	4471959..4472708 (+)	750	WP_057501401.1	hypothetical protein	-
EL200_RS20815 (NCTC13014_04148)	-	4472860..4473504 (-)	645	WP_057501400.1	hypothetical protein	-
EL200_RS20820 (NCTC13014_04149)	-	4473717..4476140 (-)	2424	WP_057501399.1	penicillin-binding protein 1A	-
EL200_RS20825 (NCTC13014_04150)	pilM	4476360..4477418 (+)	1059	WP_010484061.1	pilus assembly protein PilM	Machinery gene
EL200_RS20830 (NCTC13014_04151)	-	4477418..4478302 (+)	885	WP_049444607.1	PilN domain-containing protein	-
EL200_RS20835 (NCTC13014_04152)	pilO	4478299..4478955 (+)	657	WP_049444605.1	type 4a pilus biogenesis protein PilO	-
EL200_RS20840 (NCTC13014_04153)	-	4478952..4479488 (+)	537	WP_232015498.1	pilus assembly protein PilP	-
EL200_RS20845 (NCTC13014_04154)	-	4479510..4481483 (+)	1974	WP_057501397.1	type IV pilus secretin PilQ family protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37753.41 Da
• Isoelectric Point: 4.4089

>NTDB_id=1120737 EL200_RS20825 WP_010484061.1 4476360..4477418(+) (pilM) [Stenotrophomonas maltophilia strain NCTC13014]
MGLIPKSQSPLVGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAMNRSGSKAKLAAAA
VAGSAVITKVIPMPAELDENDMEAQIELEAVNYIPYPIEEVNLDFEVIGAIPNNPEMVQVLLAASRSENVELRQSALELG
GLQAKVMDVEAFAVENAYALVASELPVSIEGVVALVDIGATMTTLNVLRGGRSLYSREQVFGGKQLTDEIMRRYGLSYEE
AGLAKRQGGLPESYEMEVLEPFKEATVQQISRLLQFFYAGSEFNRVDHIVLAGGCAVLGGLPEMVEEQLGVPTVVANPLA
QMTLGPKVNAHALAQDAPALMIATGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1120737 EL200_RS20825 WP_010484061.1 4476360..4477418(+) (pilM) [Stenotrophomonas maltophilia strain NCTC13014]
GTGGGGCTCATCCCAAAAAGTCAGTCGCCGCTTGTAGGCGTCGACATCAGTTCGACTGCGGTAAAGCTTTTGCAGCTGTC
CCGCAGTGGCAACCGTTTTCGTGTGGAACATTACGCTGTGGAACCTCTTCCGCCGAATGCGGTGGTGGAGAAGAACATCG
TGGAAGTGGAGGCCGTGGGTGAGGCCATCCGCCGGGCGATGAACCGCTCGGGGAGCAAGGCCAAGCTGGCTGCTGCCGCC
GTCGCCGGTTCGGCGGTGATCACCAAGGTGATCCCGATGCCGGCCGAGCTCGACGAAAACGACATGGAAGCCCAGATCGA
GCTGGAAGCGGTCAACTACATTCCGTACCCGATCGAGGAAGTGAACCTGGACTTCGAGGTGATCGGGGCGATCCCGAACA
ACCCGGAGATGGTCCAGGTGCTGCTGGCCGCGTCGCGTTCGGAGAACGTGGAACTGCGCCAGTCGGCCCTGGAACTGGGT
GGCCTGCAGGCCAAGGTGATGGATGTGGAGGCCTTCGCGGTCGAGAACGCCTACGCCCTGGTCGCCAGCGAGCTGCCGGT
GTCCATCGAGGGCGTGGTCGCGCTGGTCGATATCGGCGCCACCATGACCACCCTCAATGTCCTGCGTGGTGGCCGCAGCC
TGTACAGCCGCGAACAGGTGTTCGGTGGCAAGCAGCTGACCGACGAGATCATGCGCCGCTACGGCCTGAGCTACGAGGAA
GCCGGCCTGGCCAAGCGCCAGGGCGGGCTGCCGGAAAGCTACGAGATGGAAGTGCTGGAACCGTTCAAGGAAGCCACGGT
CCAGCAGATCAGCCGCCTGCTGCAGTTCTTCTATGCAGGCAGTGAGTTCAACCGCGTTGACCACATCGTGCTGGCCGGCG
GCTGCGCTGTGCTGGGCGGGCTGCCGGAGATGGTCGAGGAACAGCTGGGCGTGCCGACCGTGGTCGCCAACCCGCTGGCG
CAGATGACCCTGGGGCCGAAGGTGAACGCGCATGCGCTCGCCCAGGATGCCCCCGCGCTGATGATCGCCACCGGTCTGGC
GCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-351)

3D structure

• AlphaFold DB: A0A0L8AA94

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.136	100	0.511
comM	Acinetobacter nosocomialis M2	51.136	100	0.511
comM	Acinetobacter baylyi ADP1	50	100	0.5
pilM	Legionella pneumophila strain ERS1305867	47.578	99.716	0.474