Detailed information NTG1119899

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: EL076_RS07070
• Genome accession: NZ_LR134275
• Coordinates: 1417898..1418824 (-)
• Length: 308 a.a.
• NCBI ID: WP_003094850.1
• Uniprot ID: -
• Organism: Streptococcus vestibularis strain NCTC12167
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1412898..1423824

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL076_RS07040 (NCTC12167_01387)	-	1412977..1413771 (-)	795	WP_126429849.1	HAD-IIB family hydrolase	-
EL076_RS07045 (NCTC12167_01388)	-	1413953..1414330 (+)	378	WP_003094041.1	GntR family transcriptional regulator	-
EL076_RS07050 (NCTC12167_01389)	-	1414335..1415033 (+)	699	WP_003094313.1	ABC transporter ATP-binding protein	-
EL076_RS07055 (NCTC12167_01390)	-	1415045..1415830 (+)	786	WP_126429851.1	ABC transporter permease	-
EL076_RS07060 (NCTC12167_01391)	amiF	1415881..1416810 (-)	930	WP_126429853.1	ATP-binding cassette domain-containing protein	Regulator
EL076_RS07065 (NCTC12167_01392)	amiE	1416803..1417888 (-)	1086	WP_003093342.1	ABC transporter ATP-binding protein	Regulator
EL076_RS07070 (NCTC12167_01393)	amiD	1417898..1418824 (-)	927	WP_003094850.1	oligopeptide ABC transporter permease OppC	Regulator
EL076_RS07075 (NCTC12167_01394)	amiC	1418824..1420317 (-)	1494	WP_126429855.1	ABC transporter permease	Regulator
EL076_RS07080 (NCTC12167_01395)	amiA	1420378..1422348 (-)	1971	WP_003093456.1	peptide ABC transporter substrate-binding protein	Regulator
EL076_RS07085 (NCTC12167_01396)	pta	1422576..1423559 (-)	984	WP_003094325.1	phosphate acetyltransferase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34681.81 Da
• Isoelectric Point: 9.5814

>NTDB_id=1119899 EL076_RS07070 WP_003094850.1 1417898..1418824(-) (amiD) [Streptococcus vestibularis strain NCTC12167]
MASIDKSKFQFVKRDDFASETIDAPAYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDSNGKSLFDSVWFGARNSILIAVIATFLNVIIGLIVGAVWGISKTFDMIMMEIYNIISNIPDLLVVIV
LTYSLGSGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRTLGTPTAKIVVKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1119899 EL076_RS07070 WP_003094850.1 1417898..1418824(-) (amiD) [Streptococcus vestibularis strain NCTC12167]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGGCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTCATGTTAGGTATCTTGATTGCCATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACAGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTCGGAGC
TCGTAATTCTATCCTTATTGCTGTTATCGCTACCTTCCTTAATGTTATAATTGGTTTGATTGTTGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCTGACCTCCTTGTGGTTATCGTC
TTGACTTACTCATTGGGTTCTGGTTTCTGGAATATGATCTTTGCCATGACTGTTACAGGATGGATTGGTATTGCCTATAC
TATCCGTATTCAAATCATGCGTTACCGTGATTTGGAGTATAACTTGGCTTCTCGTACTTTGGGAACACCAACTGCTAAGA
TTGTGGTTAAAAATATCATGCCACAACTTGTGTCAGTTATCGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTTCTTTCATACTTTGGTTTGGGACTTCCCGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCTTATCTCTTCTGGATTCCATTGACTACCTTGATCCTCGTTTCCCTTGCCCTCTTTATTG
TCGGTCAAAACTTGGCGGATGCCAGCGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (124-306)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	97.403	100	0.974
amiD	Streptococcus thermophilus LMG 18311	97.078	100	0.971
amiD	Streptococcus thermophilus LMD-9	97.078	100	0.971