Detailed information    

insolico Bioinformatically predicted

Overview


Name   cclA/cilC   Type   Machinery gene
Locus tag   ELZ47_RS08585 Genome accession   NZ_LR134002
Coordinates   1724936..1725598 (+) Length   220 a.a.
NCBI ID   WP_125330617.1    Uniprot ID   A0AAJ5NIC8
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1719936..1730598
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS08545 (NCTC10904_01673) - 1720151..1720420 (-) 270 WP_002929675.1 DUF3165 family protein -
  ELZ47_RS08550 (NCTC10904_01674) typA 1720444..1722291 (-) 1848 WP_125330614.1 translational GTPase TypA -
  ELZ47_RS08555 (NCTC10904_01675) - 1722471..1723196 (+) 726 WP_125330615.1 16S rRNA pseudouridine(516) synthase -
  ELZ47_RS08560 (NCTC10904_01676) - 1723235..1723471 (-) 237 WP_002898043.1 DUF4190 domain-containing protein -
  ELZ47_RS08565 (NCTC10904_01677) - 1723561..1723941 (-) 381 WP_002917553.1 rhodanese-like domain-containing protein -
  ELZ47_RS08570 (NCTC10904_01678) - 1723943..1724161 (-) 219 WP_002898045.1 YqgQ family protein -
  ELZ47_RS08575 (NCTC10904_01679) - 1724254..1724769 (-) 516 WP_125330616.1 Dps family protein -
  ELZ47_RS08585 (NCTC10904_01680) cclA/cilC 1724936..1725598 (+) 663 WP_125330617.1 prepilin peptidase Machinery gene
  ELZ47_RS08590 (NCTC10904_01681) trpA 1725567..1726346 (-) 780 WP_125330618.1 tryptophan synthase subunit alpha -
  ELZ47_RS08595 (NCTC10904_01682) trpB 1726339..1727562 (-) 1224 WP_125330619.1 tryptophan synthase subunit beta -
  ELZ47_RS08600 (NCTC10904_01683) - 1727552..1728139 (-) 588 WP_125330620.1 phosphoribosylanthranilate isomerase -
  ELZ47_RS08605 (NCTC10904_01684) trpC 1728126..1728893 (-) 768 WP_125330621.1 indole-3-glycerol phosphate synthase TrpC -
  ELZ47_RS08610 (NCTC10904_01685) trpD 1728890..1729894 (-) 1005 WP_125330622.1 anthranilate phosphoribosyltransferase -
  ELZ47_RS08615 (NCTC10904_01686) - 1729905..1730468 (-) 564 WP_125330623.1 aminodeoxychorismate/anthranilate synthase component II -

Sequence


Protein


Download         Length: 220 a.a.        Molecular weight: 24738.04 Da        Isoelectric Point: 8.5747

>NTDB_id=1117829 ELZ47_RS08585 WP_125330617.1 1724936..1725598(+) (cclA/cilC) [Streptococcus sanguinis strain NCTC 10904]
MIHLYFFLLGTIFASFLGLVIDRFPEHSIITPASHCNACGKRLAPRDLIPIFSQILNLLRCRFCGDKIPLRYLFFECILG
GLFLATSLGTISISQLLLLTMGLTLAIYDQREQQYPLMVWLFFQLSLMMTASVNPLMLFFLALGLLAFFYNLRIGAGDFL
FLASCSAIFSLTEILILIQIASFSGLACFCFKKKKDRLAFVPCLLFGVVVIISYKLLLLG

Nucleotide


Download         Length: 663 bp        

>NTDB_id=1117829 ELZ47_RS08585 WP_125330617.1 1724936..1725598(+) (cclA/cilC) [Streptococcus sanguinis strain NCTC 10904]
ATGATTCATCTATACTTTTTTCTCCTTGGCACTATTTTCGCCTCCTTCCTAGGCTTGGTCATCGACCGTTTTCCAGAGCA
TTCTATCATCACTCCTGCTAGCCATTGCAATGCCTGCGGGAAAAGATTGGCACCGCGTGATTTGATTCCTATTTTTTCTC
AAATCTTAAATCTTCTTCGTTGCCGCTTCTGTGGAGACAAGATTCCCTTACGCTATTTATTTTTTGAATGCATCTTGGGC
GGTCTTTTTCTGGCAACCTCACTTGGCACGATTTCCATCAGTCAACTCCTACTACTCACCATGGGCTTGACCCTAGCCAT
CTACGATCAAAGAGAGCAGCAATATCCCCTGATGGTCTGGCTGTTTTTTCAGCTTTCACTGATGATGACAGCAAGTGTCA
ATCCTCTCATGCTCTTCTTTTTAGCCCTAGGACTTCTAGCCTTCTTTTATAATCTTCGTATTGGAGCTGGCGACTTTCTA
TTTCTCGCTTCCTGCTCAGCTATTTTCAGCCTGACAGAGATTCTCATTCTTATCCAAATCGCTAGCTTCTCCGGTCTCGC
CTGTTTTTGCTTTAAAAAGAAAAAAGACAGGCTAGCATTTGTACCTTGTCTTTTGTTTGGTGTGGTGGTGATTATTTCTT
ATAAGCTGCTGCTTCTTGGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis NCTC 12261

59.817

99.545

0.595

  cclA/cilC Streptococcus mitis SK321

59.361

99.545

0.591

  cclA/cilC Streptococcus pneumoniae Rx1

57.534

99.545

0.573

  cclA/cilC Streptococcus pneumoniae D39

57.534

99.545

0.573

  cclA/cilC Streptococcus pneumoniae R6

57.534

99.545

0.573

  cclA/cilC Streptococcus pneumoniae TIGR4

57.078

99.545

0.568


Multiple sequence alignment