Detailed information NTG1117010

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: EJN10_RS05500
• Genome accession: NZ_LR130528
• Coordinates: 1130027..1131091 (+)
• Length: 354 a.a.
• NCBI ID: WP_124101798.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa isolate paerg000
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1125027..1136091

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EJN10_RS05490 (BANRA_01060)	-	1125998..1127266 (+)	1269	WP_004347579.1	malic enzyme-like NAD(P)-binding protein	-
EJN10_RS05495 (BANRA_01061)	-	1127371..1129842 (-)	2472	WP_124033760.1	penicillin-binding protein 1A	-
EJN10_RS05500 (BANRA_01062)	pilM	1130027..1131091 (+)	1065	WP_124101798.1	type IV pilus assembly protein PilM	Machinery gene
EJN10_RS05505 (BANRA_01063)	pilN	1131091..1131687 (+)	597	WP_003095839.1	type 4a pilus biogenesis protein PilN	-
EJN10_RS05510 (BANRA_01064)	pilO	1131684..1132307 (+)	624	WP_003103268.1	type 4a pilus biogenesis protein PilO	-
EJN10_RS05515 (BANRA_01065)	pilP	1132304..1132828 (+)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
EJN10_RS05520 (BANRA_01066)	pilQ	1132882..1135026 (+)	2145	WP_125120841.1	type 4a pilus secretin PilQ	Machinery gene
EJN10_RS05525 (BANRA_01067)	aroK	1135038..1135556 (+)	519	WP_003095833.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37982.49 Da
• Isoelectric Point: 4.5844

>NTDB_id=1117010 EJN10_RS05500 WP_124101798.1 1130027..1131091(+) (pilM) [Pseudomonas aeruginosa isolate paerg000]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVNVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1117010 EJN10_RS05500 WP_124101798.1 1130027..1131091(+) (pilM) [Pseudomonas aeruginosa isolate paerg000]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGGCTCTCCGCGC
GCAATCCCGAGCGCGTGAACGTACTCCTGGCCGCCTGTCGGAAAGAAAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	56.18	100	0.565
comM	Acinetobacter nosocomialis M2	56.18	100	0.565
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.328	100	0.463