Detailed information NTG1116268

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: EQB42_RS04845
• Genome accession: NZ_LR129841
• Coordinates: 913747..914700 (+)
• Length: 317 a.a.
• NCBI ID: WP_050131685.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 947 isolate 947
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 908747..919700

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQB42_RS04820	rpmG	909490..909639 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
EQB42_RS04825	secG	909679..909912 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
EQB42_RS04830	rnr	910014..912368 (+)	2355	WP_000654917.1	ribonuclease R	-
EQB42_RS04835	smpB	912331..912798 (+)	468	WP_001051747.1	SsrA-binding protein SmpB	-
EQB42_RS04840	tehB	912814..913674 (+)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
EQB42_RS04845	coiA	913747..914700 (+)	954	WP_050131685.1	competence protein CoiA	Machinery gene
EQB42_RS04850	pepF	914719..916521 (+)	1803	WP_000244118.1	oligoendopeptidase F	Regulator
EQB42_RS04855	-	916523..917236 (+)	714	WP_000230399.1	O-methyltransferase	-
EQB42_RS04860	prsA	917303..918244 (+)	942	WP_000727952.1	peptidylprolyl isomerase PrsA	-
EQB42_RS04865	-	918363..918704 (-)	342	Protein_923	transposase	-
EQB42_RS04875	-	919117..919212 (+)	96	Protein_924	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=1116268 EQB42_RS04845 WP_050131685.1 913747..914700(+) (coiA) [Streptococcus pneumoniae strain 947 isolate 947]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWIKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=1116268 EQB42_RS04845 WP_050131685.1 913747..914700(+) (coiA) [Streptococcus pneumoniae strain 947 isolate 947]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGATCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.369	100	0.994
coiA	Streptococcus pneumoniae Rx1	98.738	100	0.987
coiA	Streptococcus pneumoniae D39	98.738	100	0.987
coiA	Streptococcus pneumoniae R6	98.738	100	0.987
coiA	Streptococcus mitis NCTC 12261	88.644	100	0.886
coiA	Lactococcus lactis subsp. cremoris KW2	41.975	100	0.429