Detailed information NTG1116190

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: EQB41_RS04990
• Genome accession: NZ_LR129840
• Coordinates: 914313..915266 (+)
• Length: 317 a.a.
• NCBI ID: WP_127820767.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 4496 isolate 4496
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 909313..920266

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQB41_RS04965	rpmG	910056..910205 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
EQB41_RS04970	secG	910245..910478 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
EQB41_RS04975	rnr	910580..912934 (+)	2355	WP_000654877.1	ribonuclease R	-
EQB41_RS04980	smpB	912897..913364 (+)	468	WP_001051753.1	SsrA-binding protein SmpB	-
EQB41_RS04985	tehB	913380..914240 (+)	861	WP_000413758.1	SAM-dependent methyltransferase TehB	-
EQB41_RS04990	coiA	914313..915266 (+)	954	WP_127820767.1	competence protein CoiA	Machinery gene
EQB41_RS04995	pepF	915285..917087 (+)	1803	WP_000244122.1	oligoendopeptidase F	Regulator
EQB41_RS05000	-	917089..917802 (+)	714	WP_000230399.1	O-methyltransferase	-
EQB41_RS05005	prsA	917869..918810 (+)	942	WP_000727933.1	peptidylprolyl isomerase PrsA	-
EQB41_RS05010	-	918927..919268 (-)	342	Protein_947	IS3 family transposase	-
EQB41_RS05020	-	919681..919776 (+)	96	Protein_948	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38218.87 Da
• Isoelectric Point: 8.8381

>NTDB_id=1116190 EQB41_RS04990 WP_127820767.1 914313..915266(+) (coiA) [Streptococcus pneumoniae strain 4496 isolate 4496]
MFVARDAMGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=1116190 EQB41_RS04990 WP_127820767.1 914313..915266(+) (coiA) [Streptococcus pneumoniae strain 4496 isolate 4496]
ATGTTTGTTGCGAGAGATGCTATGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGATATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.593	100	0.435