Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | TTHNP4_RS01395 | Genome accession | NZ_LR027517 |
| Coordinates | 238681..239304 (-) | Length | 207 a.a. |
| NCBI ID | WP_011228637.1 | Uniprot ID | A0A3P4AP50 |
| Organism | Thermus thermophilus isolate TTHNAR1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 233681..244304
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TTHNP4_RS01375 (TTHN1_00274) | aroC | 233743..234894 (-) | 1152 | WP_124104238.1 | chorismate synthase | - |
| TTHNP4_RS01380 (TTHN1_00275) | pilQ | 234953..237226 (-) | 2274 | WP_124104239.1 | secretin N-terminal domain-containing protein | Machinery gene |
| TTHNP4_RS14400 (TTHN1_00276) | pilW | 237223..238113 (-) | 891 | WP_124104240.1 | competence protein | Machinery gene |
| TTHNP4_RS01390 (TTHN1_00277) | pilO | 238110..238691 (-) | 582 | WP_124104241.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| TTHNP4_RS01395 (TTHN1_00278) | pilN | 238681..239304 (-) | 624 | WP_011228637.1 | competence protein | Machinery gene |
| TTHNP4_RS01400 (TTHN1_00279) | pilM | 239297..240430 (-) | 1134 | WP_124104242.1 | type IV pilus assembly protein PilM | Machinery gene |
| TTHNP4_RS01405 (TTHN1_00280) | - | 240560..241564 (-) | 1005 | WP_124104243.1 | homoisocitrate dehydrogenase | - |
| TTHNP4_RS01410 (TTHN1_00281) | - | 241619..242110 (-) | 492 | WP_011173430.1 | DUF5317 domain-containing protein | - |
| TTHNP4_RS01415 (TTHN1_00282) | - | 242161..243561 (-) | 1401 | WP_124104244.1 | HD-GYP domain-containing protein | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 23063.56 Da Isoelectric Point: 9.7530
>NTDB_id=1115714 TTHNP4_RS01395 WP_011228637.1 238681..239304(-) (pilN) [Thermus thermophilus isolate TTHNAR1]
MIRLNLLPKNLRRRVEPGWWRLLALLFALVVLGVLGLVHYTAYTELSLAKAERDQLQAEVEALRPFIAELGRLQEERKAL
EALLAIREGLEKNAVPWSQYLAAFINQIPRAGGRLEVALRSVSARALSEEEAARLAQEGTYDGKRIRVEFALQGEALSRE
ALVRFIRAFETSPRFGIEFQGASLDEGRGLYTFSARVGVTGGESGAR
MIRLNLLPKNLRRRVEPGWWRLLALLFALVVLGVLGLVHYTAYTELSLAKAERDQLQAEVEALRPFIAELGRLQEERKAL
EALLAIREGLEKNAVPWSQYLAAFINQIPRAGGRLEVALRSVSARALSEEEAARLAQEGTYDGKRIRVEFALQGEALSRE
ALVRFIRAFETSPRFGIEFQGASLDEGRGLYTFSARVGVTGGESGAR
Nucleotide
Download Length: 624 bp
>NTDB_id=1115714 TTHNP4_RS01395 WP_011228637.1 238681..239304(-) (pilN) [Thermus thermophilus isolate TTHNAR1]
TTGATTAGGCTGAACCTTCTTCCCAAGAACCTCCGGCGCCGGGTGGAGCCGGGTTGGTGGCGCCTTCTCGCCCTCCTCTT
CGCCCTCGTCGTGCTAGGGGTCTTGGGGCTCGTCCACTACACCGCCTACACCGAGCTTTCCCTGGCCAAGGCGGAACGGG
ACCAGCTCCAGGCGGAGGTGGAGGCCTTGAGGCCCTTCATCGCCGAACTCGGCCGCCTGCAGGAGGAGCGCAAGGCCCTC
GAGGCCCTCCTCGCCATCCGGGAAGGCCTGGAGAAAAACGCCGTGCCCTGGTCCCAGTACCTGGCCGCCTTCATCAACCA
GATCCCCAGGGCGGGGGGGCGCCTCGAGGTGGCCCTCCGCTCGGTGAGCGCCCGTGCCCTCTCGGAAGAGGAGGCCGCCC
GCCTGGCCCAGGAGGGCACCTACGACGGCAAGCGGATCCGGGTGGAGTTCGCCCTCCAGGGGGAGGCCTTGAGCCGGGAG
GCCCTGGTCCGGTTCATCCGGGCCTTTGAGACCTCCCCCCGGTTCGGCATTGAGTTCCAGGGCGCCTCCCTGGACGAGGG
CCGGGGGCTTTACACCTTCAGCGCCCGCGTGGGCGTGACGGGGGGTGAAAGCGGTGCTCGCTAG
TTGATTAGGCTGAACCTTCTTCCCAAGAACCTCCGGCGCCGGGTGGAGCCGGGTTGGTGGCGCCTTCTCGCCCTCCTCTT
CGCCCTCGTCGTGCTAGGGGTCTTGGGGCTCGTCCACTACACCGCCTACACCGAGCTTTCCCTGGCCAAGGCGGAACGGG
ACCAGCTCCAGGCGGAGGTGGAGGCCTTGAGGCCCTTCATCGCCGAACTCGGCCGCCTGCAGGAGGAGCGCAAGGCCCTC
GAGGCCCTCCTCGCCATCCGGGAAGGCCTGGAGAAAAACGCCGTGCCCTGGTCCCAGTACCTGGCCGCCTTCATCAACCA
GATCCCCAGGGCGGGGGGGCGCCTCGAGGTGGCCCTCCGCTCGGTGAGCGCCCGTGCCCTCTCGGAAGAGGAGGCCGCCC
GCCTGGCCCAGGAGGGCACCTACGACGGCAAGCGGATCCGGGTGGAGTTCGCCCTCCAGGGGGAGGCCTTGAGCCGGGAG
GCCCTGGTCCGGTTCATCCGGGCCTTTGAGACCTCCCCCCGGTTCGGCATTGAGTTCCAGGGCGCCTCCCTGGACGAGGG
CCGGGGGCTTTACACCTTCAGCGCCCGCGTGGGCGTGACGGGGGGTGAAAGCGGTGCTCGCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Thermus thermophilus HB27 |
99.517 |
100 |
0.995 |