Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ABR2090_RS01695 | Genome accession | NZ_LN868200 |
| Coordinates | 356726..357175 (+) | Length | 149 a.a. |
| NCBI ID | WP_000993719.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii isolate R2090 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 351726..362175
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABR2090_RS01675 (ABR2090_0336) | - | 353117..354004 (+) | 888 | WP_001017323.1 | metal-dependent hydrolase | - |
| ABR2090_RS01680 (ABR2090_0337) | - | 354136..354726 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| ABR2090_RS01685 (ABR2090_0338) | - | 354748..355830 (+) | 1083 | WP_001246384.1 | YgcG family protein | - |
| ABR2090_RS01690 (ABR2090_0339) | - | 355824..356384 (+) | 561 | WP_000258949.1 | TPM domain-containing protein | - |
| ABR2090_RS01695 (ABR2090_0340) | pilA | 356726..357175 (+) | 450 | WP_000993719.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ABR2090_RS01700 (ABR2090_0341) | - | 357226..358536 (+) | 1311 | WP_000914625.1 | O-antigen ligase | - |
| ABR2090_RS01705 (ABR2090_0342) | - | 358644..360272 (+) | 1629 | WP_015451633.1 | PglL family O-oligosaccharyltransferase | - |
| ABR2090_RS01710 (ABR2090_0343) | bfr | 360314..360778 (-) | 465 | WP_000678121.1 | bacterioferritin | - |
| ABR2090_RS01715 (ABR2090_0344) | - | 361023..361217 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| ABR2090_RS01720 (ABR2090_0345) | - | 361427..361810 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15166.27 Da Isoelectric Point: 8.4527
>NTDB_id=1114806 ABR2090_RS01695 WP_000993719.1 356726..357175(+) (pilA) [Acinetobacter baumannii isolate R2090]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQSYIAKSQASEAFTLADGLKTTIATNLQAGTCFANGSAAATATDSVTGKY
GKAEILADTTSGSNGCGIKYTFNPSNVSAKLKNGVIGIAVSENGVLKKSTVTATTSTLNEYLPQSFSGS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQSYIAKSQASEAFTLADGLKTTIATNLQAGTCFANGSAAATATDSVTGKY
GKAEILADTTSGSNGCGIKYTFNPSNVSAKLKNGVIGIAVSENGVLKKSTVTATTSTLNEYLPQSFSGS
Nucleotide
Download Length: 450 bp
>NTDB_id=1114806 ABR2090_RS01695 WP_000993719.1 356726..357175(+) (pilA) [Acinetobacter baumannii isolate R2090]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATCGGTATTTTGGCGGCAATTGCGAT
TCCTGCTTATCAGAGTTATATTGCAAAATCTCAAGCTTCTGAAGCATTTACATTAGCAGATGGTCTAAAAACAACTATTG
CTACTAACTTGCAAGCTGGTACATGTTTCGCTAATGGTTCAGCTGCAGCAACAGCAACTGACTCAGTTACGGGTAAATAT
GGTAAAGCAGAAATTTTAGCAGATACAACGTCTGGTAGTAATGGATGTGGGATTAAATATACATTTAATCCATCAAATGT
ATCTGCTAAGTTGAAAAACGGAGTTATTGGTATTGCTGTAAGTGAAAATGGTGTATTGAAAAAATCTACAGTAACAGCGA
CAACTTCTACATTAAATGAATATTTACCACAATCTTTCTCTGGTTCTTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATCGGTATTTTGGCGGCAATTGCGAT
TCCTGCTTATCAGAGTTATATTGCAAAATCTCAAGCTTCTGAAGCATTTACATTAGCAGATGGTCTAAAAACAACTATTG
CTACTAACTTGCAAGCTGGTACATGTTTCGCTAATGGTTCAGCTGCAGCAACAGCAACTGACTCAGTTACGGGTAAATAT
GGTAAAGCAGAAATTTTAGCAGATACAACGTCTGGTAGTAATGGATGTGGGATTAAATATACATTTAATCCATCAAATGT
ATCTGCTAAGTTGAAAAACGGAGTTATTGGTATTGCTGTAAGTGAAAATGGTGTATTGAAAAAATCTACAGTAACAGCGA
CAACTTCTACATTAAATGAATATTTACCACAATCTTTCTCTGGTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter nosocomialis M2 |
67.785 |
100 |
0.678 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
39.333 |
100 |
0.396 |
| pilA | Vibrio cholerae strain A1552 |
39.333 |
100 |
0.396 |
| pilA | Vibrio cholerae C6706 |
39.333 |
100 |
0.396 |