Detailed information NTG1114532

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: CCOS191_RS19030
• Genome accession: NZ_LN847264
• Coordinates: 4298164..4300368 (-)
• Length: 734 a.a.
• NCBI ID: WP_046856544.1
• Uniprot ID: A0A0F7Y9E1
• Organism: Pseudomonas sp. CCOS 191
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4293164..4305368

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCOS191_RS18995 (CCOS191_3775)	murB	4293221..4294240 (-)	1020	WP_046856540.1	UDP-N-acetylmuramate dehydrogenase	-
CCOS191_RS19000 (CCOS191_3776)	-	4294237..4294701 (-)	465	WP_046856541.1	low molecular weight protein-tyrosine-phosphatase	-
CCOS191_RS19005 (CCOS191_3777)	kdsB	4294701..4295465 (-)	765	WP_038705673.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CCOS191_RS19010 (CCOS191_3778)	-	4295462..4295647 (-)	186	WP_003247142.1	Trm112 family protein	-
CCOS191_RS19015 (CCOS191_3779)	lpxK	4295681..4296691 (-)	1011	WP_046856542.1	tetraacyldisaccharide 4'-kinase	-
CCOS191_RS19020 (CCOS191_3780)	-	4296691..4297125 (-)	435	WP_023632003.1	biopolymer transporter ExbD	-
CCOS191_RS19025 (CCOS191_3781)	exbB	4297122..4297757 (-)	636	WP_046856543.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
CCOS191_RS19030 (CCOS191_3782)	comA	4298164..4300368 (-)	2205	WP_046856544.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CCOS191_RS27585 (CCOS191_3783)	-	4300513..4301160 (+)	648	WP_156177663.1	DUF2062 domain-containing protein	-
CCOS191_RS19035 (CCOS191_3784)	-	4301044..4301823 (-)	780	WP_046856545.1	ABC transporter permease	-
CCOS191_RS19040 (CCOS191_3785)	-	4301820..4302752 (-)	933	WP_046856546.1	ABC transporter ATP-binding protein	-
CCOS191_RS19045 (CCOS191_3786)	-	4302886..4303509 (-)	624	WP_046856547.1	glutathione S-transferase	-
CCOS191_RS19050 (CCOS191_3787)	-	4304201..4304440 (+)	240	WP_046856548.1	hypothetical protein	-
CCOS191_RS19055 (CCOS191_3788)	-	4304437..4304676 (+)	240	WP_046856549.1	DUF3077 domain-containing protein	-

Sequence

Protein

• Length: 734 a.a.
• Molecular weight: 79520.25 Da
• Isoelectric Point: 11.0480

>NTDB_id=1114532 CCOS191_RS19030 WP_046856544.1 4298164..4300368(-) (comA) [Pseudomonas sp. CCOS 191]
MRTGMLALVLGLLSLRFLPVLPPVGWLIPLLLLALACLRTRAWPLGWFVLGGCWACWSAQQALDDRLAPALDGRTLWLEG
RVVGLPTRTERGVRFELEHPESRRAQLPRRLQLSWFAGPELRAGERWRLAVSLRQPHGLLNPHGPDREALLLARGIGATG
SVKAGEQVGQAAADWRDAVRQRLMNVDAHGREAALTALVLGDGAGLAREDWQTLQATGTVHLLVISGQHIGLLAGLVYGL
VAGLARLGAWPSRWPWLPWACGLAMAAALGYGWLAGFGVPVQRACLMLAVVLLWRLRFRHLGAALPLLLALSGVLLINPL
ASLLPGFWLSFAAVGVLMLCFSARLGAWRPWQAWSRAQWVIAVGLLPVLLALGLPVSLTAPLANLLAVPWISFAVLPLAL
LGTATLPVPGVGEGLLWLAGLSLDGLFRLLAQLAGQWPAWLPEPLPLWAWLLVALGALLLLLPRGVPLRLPGAVMLLALW
APREQVPLGQVQVWQLDVGQGLAVLLRTRHHALLYDAGPAHGDSDLGESVVLPTLRRLGVRHLDLMLVSHGHADHAGGAA
AVRRGLPVTRVLAGEVAGLAPAALCESGERWRWDGVDFELWHWPQGTSSNDRSCVLRVVANGERLLLAGDMEAAAERAWL
AASEDPRVDWLQAPHHGSRTSSTEPFIKALAPRGVMISRGRSNGFGHPHAQVIERYRRHGVSIHDTAVEGALRLMLGSHG
GVEGVRRGRRYWRD

Nucleotide

• Length: 2205 bp

>NTDB_id=1114532 CCOS191_RS19030 WP_046856544.1 4298164..4300368(-) (comA) [Pseudomonas sp. CCOS 191]
ATGCGCACAGGGATGCTGGCGCTGGTGCTCGGGCTGTTGAGCCTGCGCTTTTTGCCCGTTTTGCCGCCGGTCGGGTGGCT
GATTCCGTTGCTGTTGCTGGCCTTGGCCTGCCTGCGTACGCGGGCCTGGCCGCTGGGCTGGTTTGTGCTGGGTGGCTGCT
GGGCCTGCTGGTCGGCGCAGCAGGCGCTGGATGATCGCCTGGCCCCGGCGCTGGATGGCCGCACGCTGTGGTTGGAGGGG
CGGGTGGTGGGGCTGCCGACCCGCACGGAGCGTGGCGTGCGTTTCGAGCTGGAGCATCCTGAGTCGCGTCGGGCGCAATT
GCCCAGGCGCCTGCAACTGAGCTGGTTCGCCGGGCCTGAATTGCGTGCCGGTGAGCGTTGGCGTCTGGCGGTGAGCCTGC
GCCAGCCCCACGGGCTGCTGAACCCCCATGGCCCGGACCGCGAAGCATTGTTGTTGGCCCGGGGTATCGGCGCCACCGGC
TCAGTCAAGGCCGGCGAGCAGGTCGGGCAGGCAGCAGCGGACTGGCGCGATGCCGTGCGCCAGCGGCTGATGAACGTGGA
TGCCCATGGGCGCGAGGCGGCGCTGACGGCCTTGGTGCTGGGCGACGGCGCCGGGCTGGCCCGCGAGGACTGGCAGACCC
TGCAGGCCACCGGCACGGTGCACCTGCTGGTGATCTCCGGCCAGCATATCGGGCTGTTGGCCGGGCTGGTGTACGGCCTG
GTCGCGGGCCTGGCGCGGCTGGGCGCCTGGCCATCGCGCTGGCCATGGCTGCCCTGGGCTTGTGGCCTGGCCATGGCCGC
GGCATTGGGCTACGGCTGGCTGGCCGGCTTCGGCGTACCGGTGCAACGGGCCTGCCTGATGCTGGCGGTGGTGTTGCTCT
GGCGCCTGCGCTTCAGGCACCTGGGGGCAGCATTGCCGTTGCTGTTGGCGTTGTCGGGGGTGTTGCTGATCAATCCCTTG
GCCAGCCTGCTGCCGGGTTTCTGGCTGTCGTTTGCCGCGGTTGGCGTGCTGATGCTGTGCTTCTCTGCCCGGCTCGGCGC
CTGGCGGCCCTGGCAGGCCTGGAGCCGTGCCCAGTGGGTAATCGCCGTGGGCCTGTTGCCGGTGCTGCTGGCGCTGGGGC
TGCCGGTCAGCCTGACGGCGCCGCTGGCCAACCTGCTGGCGGTGCCCTGGATCAGTTTCGCGGTGTTGCCGCTGGCCTTG
CTCGGCACGGCGACGTTGCCGGTGCCCGGGGTGGGGGAGGGGCTGCTGTGGCTGGCGGGGCTTTCGCTGGATGGGCTGTT
TCGCCTGCTGGCGCAGCTTGCGGGGCAGTGGCCTGCATGGCTGCCCGAACCGTTGCCGCTGTGGGCCTGGCTGTTGGTCG
CGCTGGGCGCGCTGTTGCTGCTGCTGCCTCGGGGCGTGCCGTTGCGCTTGCCGGGCGCGGTGATGCTGCTGGCCTTGTGG
GCGCCGCGCGAGCAGGTGCCCCTTGGGCAGGTGCAGGTGTGGCAGCTGGATGTCGGCCAGGGCCTGGCGGTGCTGCTGCG
TACCCGTCATCACGCGCTGTTGTACGACGCCGGGCCTGCGCATGGGGACAGCGACCTGGGCGAGAGCGTGGTGCTGCCCA
CCTTGCGCAGGTTGGGGGTCAGGCACCTCGACCTGATGCTGGTCAGCCACGGTCACGCCGATCATGCCGGCGGGGCGGCG
GCGGTGCGCCGGGGGCTGCCGGTAACGCGGGTGCTGGCCGGGGAGGTTGCCGGGCTTGCGCCTGCCGCGCTGTGCGAAAG
TGGTGAGCGCTGGCGCTGGGACGGGGTCGATTTCGAGCTGTGGCATTGGCCGCAAGGCACGTCCAGCAACGACCGTTCCT
GCGTGCTGCGGGTGGTGGCCAACGGCGAGCGCCTGCTGCTGGCCGGCGACATGGAGGCCGCGGCGGAGCGGGCCTGGCTG
GCGGCCAGCGAGGATCCGCGTGTCGACTGGCTGCAGGCGCCGCACCACGGCAGCCGCACGTCGTCCACCGAACCGTTCAT
CAAGGCGCTGGCGCCACGCGGGGTGATGATTTCGCGGGGGAGGAGCAACGGCTTCGGGCATCCGCATGCGCAGGTGATCG
AGCGCTATCGGCGGCATGGAGTCAGCATCCATGACACGGCGGTGGAGGGGGCGTTGCGGTTGATGTTGGGGAGTCATGGC
GGGGTGGAGGGTGTGCGGAGGGGGCGGCGGTACTGGCGGGATTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-675)

• Domain of unknown function (DUF4131) (DUF4131) (21-167)

3D structure

• AlphaFold DB: A0A0F7Y9E1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.028	98.093	0.579
comA	Ralstonia pseudosolanacearum GMI1000	36.407	100	0.42