Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FOA32_RS07440 Genome accession   NZ_JABTYC020000010
Coordinates   57536..58297 (+) Length   253 a.a.
NCBI ID   WP_217473257.1    Uniprot ID   -
Organism   Streptococcus sinensis strain Forsyth1A     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 52536..63297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOA32_RS07410 (FOA32_001480) comE 53050..53796 (-) 747 Protein_49 competence system response regulator transcription factor ComE -
  FOA32_RS07415 (FOA32_001481) comD/comD1 53793..55139 (-) 1347 WP_217473256.1 ATP-binding protein Regulator
  FOA32_RS07420 (FOA32_001482) comC 55179..55313 (-) 135 WP_148881652.1 bacteriocin Regulator
  FOA32_RS07430 (FOA32_001483) rlmH 55611..56090 (-) 480 WP_037615060.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FOA32_RS07435 (FOA32_001484) htrA 56294..57472 (+) 1179 WP_037615063.1 S1C family serine protease Regulator
  FOA32_RS07440 (FOA32_001485) spo0J 57536..58297 (+) 762 WP_217473257.1 ParB/RepB/Spo0J family partition protein Regulator
  FOA32_RS07445 (FOA32_001486) dnaA 58510..59865 (+) 1356 WP_037615069.1 chromosomal replication initiator protein DnaA -
  FOA32_RS07450 (FOA32_001487) dnaN 60023..61159 (+) 1137 WP_217473258.1 DNA polymerase III subunit beta -
  FOA32_RS07455 (FOA32_001488) - 61332..61526 (+) 195 WP_062201624.1 DUF951 domain-containing protein -
  FOA32_RS07460 (FOA32_001489) ychF 61746..62861 (+) 1116 WP_037615076.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 253 a.a.        Molecular weight: 29392.14 Da        Isoelectric Point: 9.7010

>NTDB_id=1112709 FOA32_RS07440 WP_217473257.1 57536..58297(+) (spo0J) [Streptococcus sinensis strain Forsyth1A]
MENYQYISLKDIRTNPYQPRKNFSQEKMNELAASIKENGIIQPIILRKSSLFGYEILAGERRFRAAKLAGLENIPALIKD
LSDDEMMKQAIIENLQREDLNPIEEAESYQHLIDRGLTHEEIATIMGKSRPYISNLVRLLHLPTFILNAIKEEVISQGHA
RLLIPLKKEEQSFWLEKIIQNNLSVRALEHSLQKRKKLKSKKTKEIFAHSEEEKLKKILGLDVTIQLKGHSKGKIIIPFE
NEEEYQRIINSLK

Nucleotide


Download         Length: 762 bp        

>NTDB_id=1112709 FOA32_RS07440 WP_217473257.1 57536..58297(+) (spo0J) [Streptococcus sinensis strain Forsyth1A]
ATGGAAAATTATCAATATATATCACTAAAAGACATTCGAACAAACCCTTATCAACCTAGAAAAAATTTTTCTCAAGAAAA
GATGAATGAGTTAGCGGCTTCCATTAAAGAAAATGGAATTATTCAGCCTATTATTTTGAGAAAATCTTCCTTATTTGGTT
ACGAAATTTTGGCAGGCGAAAGAAGATTTAGAGCTGCTAAACTTGCTGGATTAGAAAACATTCCTGCCCTTATTAAAGAC
CTATCTGATGATGAAATGATGAAACAAGCCATTATTGAAAATTTGCAAAGAGAGGATCTAAATCCAATTGAGGAAGCTGA
ATCTTATCAGCATCTGATTGACAGGGGCTTGACTCACGAAGAAATTGCAACAATTATGGGAAAATCCAGACCTTATATCA
GTAATCTTGTACGTTTGTTACATCTGCCCACTTTCATCCTTAATGCTATCAAAGAGGAAGTCATTTCTCAAGGACATGCT
CGCCTCTTGATCCCCCTTAAGAAAGAAGAACAATCCTTCTGGCTTGAAAAAATTATTCAAAACAATCTATCCGTGCGTGC
TCTTGAACATTCATTACAAAAAAGAAAAAAGTTAAAGTCTAAGAAGACGAAAGAAATTTTTGCTCATTCTGAAGAAGAAA
AACTGAAAAAAATCCTTGGTTTGGATGTCACTATTCAATTAAAAGGTCATTCAAAAGGAAAAATAATTATTCCTTTTGAA
AATGAGGAAGAATACCAAAGAATTATAAACAGCTTGAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-191)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

52.569

100

0.526

Multiple sequence alignment