Detailed information NTG1112449

Bioinformatically predicted

Overview

• Name: pilP
• Type: Machinery gene
• Locus tag: KHN79_RS12505
• Genome accession: NZ_HG992749
• Coordinates: 2740929..2741444 (-)
• Length: 171 a.a.
• NCBI ID: WP_182011507.1
• Uniprot ID: -
• Organism: Vibrio sp. B1FLJ16
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2735929..2746444

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHN79_RS12490 (ACOMICROBIO_LOCUS1816)	aroB	2737325..2738425 (-)	1101	WP_182011504.1	3-dehydroquinate synthase	-
KHN79_RS12495 (ACOMICROBIO_LOCUS1817)	aroK	2738457..2738975 (-)	519	WP_182011505.1	shikimate kinase AroK	-
KHN79_RS12500 (ACOMICROBIO_LOCUS1818)	pilQ	2739164..2740897 (-)	1734	WP_182011506.1	type IV pilus secretin PilQ family protein	Machinery gene
KHN79_RS12505 (ACOMICROBIO_LOCUS1819)	pilP	2740929..2741444 (-)	516	WP_182011507.1	pilus assembly protein PilP	Machinery gene
KHN79_RS12510 (ACOMICROBIO_LOCUS1820)	pilO	2741434..2742027 (-)	594	WP_182011508.1	type 4a pilus biogenesis protein PilO	Machinery gene
KHN79_RS12515 (ACOMICROBIO_LOCUS1821)	pilN	2742020..2742595 (-)	576	WP_182011509.1	PilN domain-containing protein	Machinery gene
KHN79_RS12520 (ACOMICROBIO_LOCUS1822)	pilM	2742579..2743595 (-)	1017	WP_182011510.1	type IV pilus assembly protein PilM	Machinery gene
KHN79_RS12525 (ACOMICROBIO_LOCUS1823)	-	2743738..2746305 (+)	2568	WP_182011511.1	PBP1A family penicillin-binding protein	-

Sequence

Protein

• Length: 171 a.a.
• Molecular weight: 19024.11 Da
• Isoelectric Point: 10.3892

>NTDB_id=1112449 KHN79_RS12505 WP_182011507.1 2740929..2741444(-) (pilP) [Vibrio sp. B1FLJ16]
MKNRSLLVVWVATLLVGCQANDESLTDFIRGVENQARRDVEKLKPADEYVAVAYDPKILRAPFELPREATIATQPIARKD
CWQPPSRARSGKLEKFPLNQLRLKGVMGIGNTVSGLVQAPNGTVYKVAPGQYLGRNNGKVTQVTHSYLLINETLPDGLGC
WQKRKVKLALR

Nucleotide

• Length: 516 bp

>NTDB_id=1112449 KHN79_RS12505 WP_182011507.1 2740929..2741444(-) (pilP) [Vibrio sp. B1FLJ16]
ATGAAAAATAGATCTTTGCTGGTGGTCTGGGTTGCAACTTTGCTGGTGGGGTGTCAGGCGAACGATGAGTCCTTAACTGA
TTTTATTCGTGGTGTCGAAAATCAGGCCAGGCGTGATGTAGAGAAACTTAAGCCAGCTGATGAGTATGTCGCGGTTGCCT
ACGATCCCAAAATACTGCGAGCCCCTTTTGAATTGCCCAGAGAGGCGACGATAGCGACACAGCCTATCGCGAGAAAAGAC
TGCTGGCAGCCACCTTCGCGAGCGCGCTCTGGCAAGCTGGAGAAGTTCCCGTTAAATCAGCTTCGTCTTAAAGGCGTCAT
GGGAATAGGCAATACCGTTTCTGGTCTGGTACAAGCTCCGAACGGCACGGTATACAAAGTTGCGCCGGGACAGTACTTAG
GGCGAAACAACGGCAAAGTCACCCAAGTTACCCATTCCTATCTATTGATTAACGAAACGCTGCCTGATGGGTTGGGTTGT
TGGCAAAAACGCAAAGTTAAGCTGGCTTTGAGATAG

Domains

Predicted by InterproScan.

• Pilus assembly protein, PilP (PilP) (25-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilP	Vibrio campbellii strain DS40M4	83.041	100	0.83
pilP	Vibrio cholerae strain A1552	56.647	100	0.573