Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | KJB05_RS01935 | Genome accession | NZ_HG992742 |
| Coordinates | 410680..411195 (+) | Length | 171 a.a. |
| NCBI ID | WP_005438430.1 | Uniprot ID | A0A812FBL1 |
| Organism | Vibrio sp. B1ASS3 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 405680..416195
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJB05_RS01915 (ACOMICROBIO_LOCUS259) | - | 405777..408347 (-) | 2571 | WP_208445805.1 | PBP1A family penicillin-binding protein | - |
| KJB05_RS01920 (ACOMICROBIO_LOCUS260) | pilM | 408526..409542 (+) | 1017 | WP_208445806.1 | type IV pilus assembly protein PilM | Machinery gene |
| KJB05_RS01925 (ACOMICROBIO_LOCUS261) | pilN | 409526..410104 (+) | 579 | WP_005438427.1 | PilN domain-containing protein | Machinery gene |
| KJB05_RS01930 (ACOMICROBIO_LOCUS262) | pilO | 410097..410690 (+) | 594 | WP_039988232.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| KJB05_RS01935 (ACOMICROBIO_LOCUS263) | pilP | 410680..411195 (+) | 516 | WP_005438430.1 | pilus assembly protein PilP | Machinery gene |
| KJB05_RS01940 (ACOMICROBIO_LOCUS264) | pilQ | 411230..412978 (+) | 1749 | WP_199435956.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| KJB05_RS01945 (ACOMICROBIO_LOCUS265) | aroK | 413168..413686 (+) | 519 | WP_005438434.1 | shikimate kinase AroK | - |
| KJB05_RS01950 (ACOMICROBIO_LOCUS266) | aroB | 413718..414818 (+) | 1101 | WP_005438436.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19038.19 Da Isoelectric Point: 10.2756
>NTDB_id=1112376 KJB05_RS01935 WP_005438430.1 410680..411195(+) (pilP) [Vibrio sp. B1ASS3]
MRNKSLLMVCIAGVLAGCQANDESLTDFIRGVENQARRDVAKLQPAEDYVVIGYEPEILRAPFELPKEATIATQPLARQD
CWQPPSRKRVGKLERFPLNKLRLKGVMGMGSNVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVSHNYLLINETLPDGLGC
WQKRKVKLALR
MRNKSLLMVCIAGVLAGCQANDESLTDFIRGVENQARRDVAKLQPAEDYVVIGYEPEILRAPFELPKEATIATQPLARQD
CWQPPSRKRVGKLERFPLNKLRLKGVMGMGSNVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVSHNYLLINETLPDGLGC
WQKRKVKLALR
Nucleotide
Download Length: 516 bp
>NTDB_id=1112376 KJB05_RS01935 WP_005438430.1 410680..411195(+) (pilP) [Vibrio sp. B1ASS3]
ATGCGAAATAAATCTTTGCTGATGGTTTGTATTGCAGGGGTGCTAGCGGGTTGCCAAGCCAACGATGAATCACTGACAGA
CTTTATTCGTGGTGTAGAAAACCAAGCACGCCGTGACGTCGCCAAATTACAGCCCGCTGAAGACTATGTTGTCATCGGTT
ATGAGCCAGAGATTCTACGTGCGCCTTTTGAGCTCCCTAAAGAAGCCACCATCGCCACTCAACCTTTGGCCAGACAAGAT
TGTTGGCAACCGCCATCAAGAAAGCGGGTAGGTAAGTTAGAACGCTTTCCTCTCAATAAACTGCGCTTAAAAGGTGTTAT
GGGGATGGGGAGCAATGTTTCTGGTTTGGTCCAAGCACCAAATGGCACCGTTTATAAGGTGAAGCCGGGTCAGTACCTTG
GTCGTAACAATGGCAAGGTGACCCACGTATCCCACAACTATTTATTAATTAATGAAACCTTACCCGACGGTTTAGGGTGT
TGGCAAAAGCGCAAAGTTAAGTTGGCTTTGAGATAG
ATGCGAAATAAATCTTTGCTGATGGTTTGTATTGCAGGGGTGCTAGCGGGTTGCCAAGCCAACGATGAATCACTGACAGA
CTTTATTCGTGGTGTAGAAAACCAAGCACGCCGTGACGTCGCCAAATTACAGCCCGCTGAAGACTATGTTGTCATCGGTT
ATGAGCCAGAGATTCTACGTGCGCCTTTTGAGCTCCCTAAAGAAGCCACCATCGCCACTCAACCTTTGGCCAGACAAGAT
TGTTGGCAACCGCCATCAAGAAAGCGGGTAGGTAAGTTAGAACGCTTTCCTCTCAATAAACTGCGCTTAAAAGGTGTTAT
GGGGATGGGGAGCAATGTTTCTGGTTTGGTCCAAGCACCAAATGGCACCGTTTATAAGGTGAAGCCGGGTCAGTACCTTG
GTCGTAACAATGGCAAGGTGACCCACGTATCCCACAACTATTTATTAATTAATGAAACCTTACCCGACGGTTTAGGGTGT
TGGCAAAAGCGCAAAGTTAAGTTGGCTTTGAGATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio campbellii strain DS40M4 |
91.228 |
100 |
0.912 |
| pilP | Vibrio cholerae strain A1552 |
56.395 |
100 |
0.567 |