Detailed information NTG0111213

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACMCNJ_RS05035
• Genome accession: NZ_AP038788
• Coordinates: 1078700..1079821 (+)
• Length: 373 a.a.
• NCBI ID: WP_226691654.1
• Uniprot ID: -
• Organism: Rodentibacter sp. THUN1656
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1073700..1084821

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMCNJ_RS05015 (THUN1656_09440)	-	1074913..1075167 (+)	255	WP_226691658.1	hypothetical protein	-
ACMCNJ_RS05020 (THUN1656_09460)	-	1075520..1076479 (-)	960	WP_226691657.1	DNA-processing protein DprA	-
ACMCNJ_RS05025 (THUN1656_09470)	-	1076543..1077262 (-)	720	WP_226691656.1	hypothetical protein	-
ACMCNJ_RS05030 (THUN1656_09480)	-	1077274..1078266 (-)	993	WP_226691655.1	HAD family hydrolase	-
ACMCNJ_RS05035 (THUN1656_09490)	dprA	1078700..1079821 (+)	1122	WP_226691654.1	DNA-processing protein DprA	Machinery gene
ACMCNJ_RS05040 (THUN1656_09500)	yaaA	1079864..1080640 (+)	777	WP_226691653.1	peroxide stress protein YaaA	-
ACMCNJ_RS05045 (THUN1656_09510)	-	1080633..1081214 (+)	582	WP_226691652.1	hypothetical protein	-
ACMCNJ_RS05050 (THUN1656_09520)	pfkA	1081336..1082301 (+)	966	WP_226691651.1	6-phosphofructokinase	-
ACMCNJ_RS05055 (THUN1656_09530)	yceD	1082546..1083070 (+)	525	WP_226691650.1	23S rRNA accumulation protein YceD	-
ACMCNJ_RS05060 (THUN1656_09540)	rpmF	1083093..1083263 (+)	171	WP_005544470.1	50S ribosomal protein L32	-
ACMCNJ_RS05065 (THUN1656_09550)	plsX	1083285..1084304 (+)	1020	WP_226691649.1	phosphate acyltransferase PlsX	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 42027.19 Da
• Isoelectric Point: 5.0216

>NTDB_id=111213 ACMCNJ_RS05035 WP_226691654.1 1078700..1079821(+) (dprA) [Rodentibacter sp. THUN1656]
MESIDETLLRLMQVPRLGGVAIDKILSNVTLNELLNYDKEAFEQMGWGAIQIRRWFKPERKFIDPVLSWAEEEGNHLVNY
FSPFYPYLLKQIVSFPPLLFVKGNITAISQRQMAMVGSRYCTSYGEYWAKYFATELSLAGFTITSGLALGIDGYCHKAVV
DIKGQTIAVLGSGLEEIYPAKHRSLAEQILWNDGALISEFMPHQPPVAANFPRRNRIISGLSVGTLVIEATEKSGSLITA
RYALEQNREIFAVPGSVQSEFSQGCHRLIKQGAMLVENVKDILDTFYQHSIHSQTEIDFDQIETENYTPPPNPRRLVEAP
SHPKLYARIGYTPVSIDDLAEEFGLPVDVLLVQLLDLELQDLILSENGLYKRV

Nucleotide

• Length: 1122 bp

>NTDB_id=111213 ACMCNJ_RS05035 WP_226691654.1 1078700..1079821(+) (dprA) [Rodentibacter sp. THUN1656]
ATGGAAAGTATAGATGAAACCTTGCTCCGCTTAATGCAAGTGCCAAGGCTTGGTGGTGTGGCGATTGATAAAATTTTATC
GAACGTTACGTTAAATGAATTGTTGAACTACGATAAAGAAGCCTTTGAACAAATGGGGTGGGGGGCGATTCAAATCCGTC
GTTGGTTTAAGCCGGAAAGAAAATTTATCGATCCTGTGTTGTCGTGGGCGGAAGAAGAGGGGAATCATTTGGTAAATTAT
TTTTCGCCTTTTTATCCTTATTTGTTAAAACAAATTGTGAGTTTTCCGCCTTTATTGTTTGTAAAAGGGAATATTACGGC
GATTTCTCAGCGGCAAATGGCAATGGTGGGTAGCCGTTATTGCACCTCTTACGGTGAATACTGGGCGAAATATTTTGCGA
CTGAATTGTCGCTTGCCGGTTTTACCATTACAAGCGGATTAGCACTTGGTATTGATGGCTATTGCCACAAGGCGGTGGTG
GATATAAAAGGACAAACTATTGCGGTGTTAGGCAGCGGGCTTGAGGAAATTTATCCGGCGAAACATCGATCATTGGCGGA
GCAAATTTTGTGGAATGATGGGGCGTTGATCTCGGAATTTATGCCTCATCAGCCACCGGTTGCGGCAAATTTTCCACGCA
GAAATCGCATTATCAGCGGGCTTTCGGTGGGAACCTTGGTGATTGAAGCGACTGAAAAAAGCGGTTCGCTTATTACGGCA
CGTTATGCGCTAGAGCAAAATCGTGAAATTTTTGCTGTGCCGGGGAGTGTTCAAAGTGAATTTAGTCAGGGTTGTCATCG
TTTGATCAAGCAAGGGGCGATGTTGGTAGAGAATGTGAAGGATATTTTGGATACGTTTTATCAACATTCTATTCATAGCC
AAACGGAAATCGATTTTGATCAAATTGAAACGGAAAATTATACACCGCCGCCGAATCCCCGCCGATTGGTGGAAGCACCA
AGCCACCCGAAACTTTATGCGAGAATCGGCTATACGCCGGTCAGCATTGATGATTTGGCAGAGGAATTCGGTTTGCCGGT
TGATGTGTTGCTGGTACAGCTATTGGATTTGGAATTACAAGATTTAATTTTGAGCGAAAACGGTCTTTATAAACGTGTGT
AG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

• DprA winged helix domain (DprA_WH) (312-366)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	83.914	100	0.839
dprA	Glaesserella parasuis strain SC1401	52.174	92.493	0.483
dprA	Vibrio campbellii strain DS40M4	43.288	97.855	0.424
dprA	Vibrio cholerae strain A1552	41.779	99.464	0.416
dprA	Legionella pneumophila strain ERS1305867	39.678	100	0.397