Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   HMPREF9425_RS07085 Genome accession   NZ_GL831112
Coordinates   1472126..1472569 (-) Length   147 a.a.
NCBI ID   WP_003097812.1    Uniprot ID   A0AAW7QEJ0
Organism   Streptococcus vestibularis ATCC 49124     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1467126..1477569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9425_RS07065 (HMPREF9425_1479) - 1467168..1467791 (-) 624 WP_003095383.1 GTP pyrophosphokinase -
  HMPREF9425_RS07070 (HMPREF9425_1482) - 1468198..1468383 (-) 186 WP_037621567.1 hypothetical protein -
  HMPREF9425_RS07075 (HMPREF9425_1484) rcrQ 1468540..1470318 (-) 1779 WP_003097807.1 ABC transporter ATP-binding protein Regulator
  HMPREF9425_RS07080 (HMPREF9425_1485) rcrP 1470308..1472122 (-) 1815 WP_003097810.1 ABC transporter ATP-binding protein Regulator
  HMPREF9425_RS07085 (HMPREF9425_1486) rcrR 1472126..1472569 (-) 444 WP_003097812.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  HMPREF9425_RS07090 (HMPREF9425_1488) - 1472757..1473167 (-) 411 WP_003097815.1 peptide deformylase -
  HMPREF9425_RS07095 (HMPREF9425_1489) gdhA 1473305..1474657 (-) 1353 WP_003095495.1 NADP-specific glutamate dehydrogenase -
  HMPREF9425_RS07100 (HMPREF9425_1490) - 1475003..1476109 (+) 1107 WP_003097817.1 AAA family ATPase -
  HMPREF9425_RS07105 (HMPREF9425_1491) - 1476173..1476934 (+) 762 WP_003097820.1 NUDIX domain-containing protein -
  HMPREF9425_RS07110 (HMPREF9425_1492) - 1477003..1477506 (+) 504 WP_003095580.1 HdeD family acid-resistance protein -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17247.57 Da        Isoelectric Point: 6.6541

>NTDB_id=1111760 HMPREF9425_RS07085 WP_003097812.1 1472126..1472569(-) (rcrR) [Streptococcus vestibularis ATCC 49124]
MHEKDPFSEFREFINTMESRVQELGKAYGVEHLAGPQGFAVRYLFENQDKEIFIKDIEKRLSISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGEKKAQDVGYFREAIHEQLLDGISKEDAETAFRVFHQIRMNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=1111760 HMPREF9425_RS07085 WP_003097812.1 1472126..1472569(-) (rcrR) [Streptococcus vestibularis ATCC 49124]
ATGCATGAGAAAGATCCTTTTAGTGAATTCAGAGAATTCATCAATACTATGGAATCTCGCGTGCAAGAGTTGGGTAAAGC
GTATGGTGTTGAGCATTTAGCTGGCCCGCAAGGATTTGCCGTCAGGTACTTGTTTGAGAATCAAGATAAAGAAATATTTA
TCAAAGATATTGAGAAAAGACTATCTATTTCCAAGTCAGTGGCTAGTAATTTGGTCAAACGTATGGAGAAAAATGGTTTT
GTTGAATTGGTGACATCTGATAAGGACAAACGCTACAAGTATGTTCATCTGACAGACTTGGGTGAAAAGAAGGCCCAAGA
TGTCGGATATTTCCGAGAGGCTATCCATGAACAGTTGTTAGATGGTATTTCGAAAGAAGATGCTGAAACAGCTTTTCGAG
TCTTTCACCAAATTCGTATGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(42-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

57.447

95.918

0.551

Multiple sequence alignment