Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   HMPREF9319_RS05735 Genome accession   NZ_GL397128
Coordinates   1192595..1193035 (-) Length   146 a.a.
NCBI ID   WP_003065254.1    Uniprot ID   E0PEB8
Organism   Streptococcus equinus ATCC 700338     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1187595..1198035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9319_RS05720 (HMPREF9319_1188) - 1187771..1188748 (-) 978 WP_003065248.1 zinc-binding dehydrogenase -
  HMPREF9319_RS05725 (HMPREF9319_1189) rcrQ 1189015..1190787 (-) 1773 WP_003065250.1 ABC transporter ATP-binding protein Regulator
  HMPREF9319_RS05730 (HMPREF9319_1190) rcrP 1190777..1192591 (-) 1815 WP_003065252.1 ABC transporter ATP-binding protein Regulator
  HMPREF9319_RS05735 (HMPREF9319_1191) rcrR 1192595..1193035 (-) 441 WP_003065254.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  HMPREF9319_RS05740 (HMPREF9319_1192) - 1193208..1193618 (-) 411 WP_003065257.1 peptide deformylase -
  HMPREF9319_RS05745 (HMPREF9319_1193) - 1193615..1194124 (-) 510 WP_003065260.1 GNAT family N-acetyltransferase -
  HMPREF9319_RS05750 (HMPREF9319_1194) gdhA 1194401..1195750 (-) 1350 WP_003065263.1 NADP-specific glutamate dehydrogenase -
  HMPREF9319_RS05755 (HMPREF9319_1195) - 1195996..1196493 (+) 498 WP_003065265.1 DUF308 domain-containing protein -
  HMPREF9319_RS05760 (HMPREF9319_1196) queF 1196549..1197040 (-) 492 WP_003065267.1 preQ(1) synthase -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17097.56 Da        Isoelectric Point: 8.4684

>NTDB_id=1111693 HMPREF9319_RS05735 WP_003065254.1 1192595..1193035(-) (rcrR) [Streptococcus equinus ATCC 700338]
MHKKDPFSQFRDFINLAENRVHALAESHGVENLAGPQGFAVLYLHDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IQIISSIEDKRYKQVVLTELGKSKAQNIQDFYDEMHRQILAGVDHEDLKISFRVFDRILKNLENKE

Nucleotide


Download         Length: 441 bp        

>NTDB_id=1111693 HMPREF9319_RS05735 WP_003065254.1 1192595..1193035(-) (rcrR) [Streptococcus equinus ATCC 700338]
ATGCATAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAGCGGAAAATCGTGTCCATGCTCTTGCGGAAAG
TCATGGTGTTGAAAATCTGGCTGGTCCACAGGGATTTGCAGTGTTGTATCTCCATGATAATCCTGATAAAGAAATTTATA
TCAAGGATATTGAGAAGAGACTAAGAATTTCAAAGTCAGTGACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCAAATTATTTCGTCAATAGAAGATAAGCGTTATAAGCAAGTGGTGTTGACTGAACTTGGAAAATCAAAGGCTCAAAA
CATTCAAGATTTCTATGATGAAATGCATAGACAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATTTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(35-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0PEB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

55.944

97.945

0.548

Multiple sequence alignment