Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   HMPREF9319_RS05730 Genome accession   NZ_GL397128
Coordinates   1190777..1192591 (-) Length   604 a.a.
NCBI ID   WP_003065252.1    Uniprot ID   E0PEB7
Organism   Streptococcus equinus ATCC 700338     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1185777..1197591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9319_RS05705 (HMPREF9319_1185) - 1185794..1186714 (-) 921 WP_003065242.1 glycine betaine ABC transporter substrate-binding protein -
  HMPREF9319_RS05710 (HMPREF9319_1186) - 1186704..1187339 (-) 636 WP_003065244.1 ABC transporter permease -
  HMPREF9319_RS05715 (HMPREF9319_1187) - 1187329..1187781 (-) 453 WP_003065246.1 MarR family winged helix-turn-helix transcriptional regulator -
  HMPREF9319_RS05720 (HMPREF9319_1188) - 1187771..1188748 (-) 978 WP_003065248.1 zinc-binding dehydrogenase -
  HMPREF9319_RS05725 (HMPREF9319_1189) rcrQ 1189015..1190787 (-) 1773 WP_003065250.1 ABC transporter ATP-binding protein Regulator
  HMPREF9319_RS05730 (HMPREF9319_1190) rcrP 1190777..1192591 (-) 1815 WP_003065252.1 ABC transporter ATP-binding protein Regulator
  HMPREF9319_RS05735 (HMPREF9319_1191) rcrR 1192595..1193035 (-) 441 WP_003065254.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  HMPREF9319_RS05740 (HMPREF9319_1192) - 1193208..1193618 (-) 411 WP_003065257.1 peptide deformylase -
  HMPREF9319_RS05745 (HMPREF9319_1193) - 1193615..1194124 (-) 510 WP_003065260.1 GNAT family N-acetyltransferase -
  HMPREF9319_RS05750 (HMPREF9319_1194) gdhA 1194401..1195750 (-) 1350 WP_003065263.1 NADP-specific glutamate dehydrogenase -
  HMPREF9319_RS05755 (HMPREF9319_1195) - 1195996..1196493 (+) 498 WP_003065265.1 DUF308 domain-containing protein -
  HMPREF9319_RS05760 (HMPREF9319_1196) queF 1196549..1197040 (-) 492 WP_003065267.1 preQ(1) synthase -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67127.13 Da        Isoelectric Point: 5.9917

>NTDB_id=1111692 HMPREF9319_RS05730 WP_003065252.1 1190777..1192591(-) (rcrP) [Streptococcus equinus ATCC 700338]
MLKILKRLTVKEVTMLIFAVLFVCLNVYLELKIPDYMSDITTLLSTEGTKVKDIFAWNFDAPGMRMVLLSLGSFAASVVV
GFLAARIAASFSTRLRDDIFHSVLNFSDAEIKKFSIPSLLTRTTNDITQIQLVFTMGIQVITKGPIMAIWAITKIADKNH
EWLLVLIVAVAVMFLMIMFLLMMVMPKQRMIQTLTDKLNSITRESLTGIRVVRAYNAEDYQDAKFAQANDNVTNLNLFIG
RSMALLSPVMTGISSGMTLAIYWIGAHLIENIAIPTDPTKIAGAMQDKVDLFSDMVVYSSYAMQVVMGFMMMIVVFFILP
RAVVAAGRINEVLETKSSIEYPETNQAKPTEKGSVEFDNVSFRYSKNSEAVLEHVSFKAKAGDTIAFIGSTGSGKSTLVN
LIPRFYDATEGTIKVDGIDVRQYDHDTLHKIVGYIPQKAVLFSGDIASNMDMGESNSSPLDDDKMWEALDLAQGKTFVEM
KDGKLKAPVAQSGQNFSGGQKQRLAIARALARKPEIIIFDDSFSALDYKTDRILRSQLKERTADMTKLIVAQRISTIMDA
DQILVLDEGKVVGQGTHEELLANNDVYREIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=1111692 HMPREF9319_RS05730 WP_003065252.1 1190777..1192591(-) (rcrP) [Streptococcus equinus ATCC 700338]
ATGTTAAAAATTTTGAAACGCTTAACAGTAAAAGAAGTTACGATGCTTATTTTTGCTGTATTATTTGTGTGTTTGAATGT
TTATCTTGAGTTGAAAATTCCAGATTATATGTCGGATATCACAACCTTGCTATCAACAGAGGGAACAAAAGTAAAAGATA
TTTTTGCTTGGAACTTTGATGCGCCAGGGATGCGTATGGTCTTGCTTTCTTTGGGAAGCTTTGCGGCATCCGTCGTTGTC
GGTTTCCTGGCTGCTCGTATTGCGGCAAGTTTTAGTACACGTCTACGTGATGACATTTTCCATAGTGTCTTGAATTTTTC
AGATGCTGAAATCAAGAAATTTTCAATTCCTAGTCTTTTGACACGTACAACCAATGATATTACACAAATTCAATTGGTTT
TCACAATGGGAATCCAAGTCATTACTAAAGGACCTATCATGGCAATTTGGGCAATAACCAAGATTGCTGATAAAAATCAT
GAATGGCTATTGGTTCTTATTGTCGCAGTTGCGGTTATGTTCTTGATGATTATGTTCTTGTTGATGATGGTGATGCCTAA
ACAACGCATGATTCAAACATTAACCGATAAATTGAACAGTATTACGCGAGAATCATTGACAGGTATCCGTGTGGTGCGTG
CATACAATGCCGAAGATTATCAAGATGCCAAATTTGCACAAGCCAATGATAATGTTACCAATCTTAACCTCTTTATTGGA
CGTTCAATGGCGTTGTTATCTCCAGTAATGACAGGAATTTCAAGCGGAATGACACTTGCTATCTACTGGATTGGTGCGCA
TTTGATTGAAAATATTGCCATTCCGACAGATCCAACGAAAATTGCTGGCGCTATGCAAGATAAGGTTGATTTGTTCTCAG
ATATGGTTGTTTATTCATCATATGCCATGCAAGTTGTTATGGGATTCATGATGATGATTGTTGTATTCTTCATTTTACCT
CGTGCTGTTGTTGCTGCTGGGCGTATTAATGAAGTTCTTGAAACAAAATCTTCAATTGAATATCCAGAAACAAATCAAGC
TAAACCAACTGAAAAAGGTTCTGTTGAATTTGACAATGTTTCATTCCGTTACAGCAAAAATTCAGAAGCTGTTTTGGAAC
ACGTTTCCTTTAAAGCGAAAGCTGGAGACACGATTGCCTTTATCGGTTCAACTGGTTCTGGTAAATCAACTTTGGTGAAC
TTGATTCCACGTTTTTATGACGCGACAGAAGGAACGATTAAAGTCGATGGCATTGATGTTCGTCAATATGACCATGATAC
GCTTCATAAGATTGTTGGTTATATTCCGCAAAAAGCAGTGCTTTTCAGTGGGGATATCGCTTCAAATATGGATATGGGAG
AAAGCAATAGTTCGCCACTTGATGATGACAAGATGTGGGAAGCTCTTGATTTAGCTCAAGGTAAGACATTCGTTGAAATG
AAAGACGGTAAGTTAAAAGCACCTGTTGCTCAAAGTGGTCAAAACTTCTCAGGTGGTCAAAAACAACGTTTGGCAATTGC
GCGTGCTCTTGCTCGTAAACCTGAGATTATCATCTTTGATGATTCGTTCTCAGCACTTGACTACAAGACTGACCGAATCC
TTCGTTCACAGTTGAAAGAACGTACAGCTGATATGACGAAATTAATCGTAGCACAACGTATCTCAACGATTATGGACGCT
GACCAAATTTTGGTCTTGGATGAAGGTAAAGTTGTTGGTCAAGGTACGCACGAAGAATTGCTTGCAAACAACGATGTTTA
TCGTGAAATTGCTTACTCACAACTATCTAAGGAGGAATTAGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(372-522)

ABC transporter transmembrane region (ABC_membrane)

(17-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0PEB7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

66.446

100

0.666

Multiple sequence alignment