Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   HMPREF9319_RS05725 Genome accession   NZ_GL397128
Coordinates   1189015..1190787 (-) Length   590 a.a.
NCBI ID   WP_003065250.1    Uniprot ID   A0AAW6YFJ7
Organism   Streptococcus equinus ATCC 700338     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1184015..1195787
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF9319_RS05695 (HMPREF9319_1183) - 1184389..1185015 (-) 627 WP_003065238.1 ABC transporter permease -
  HMPREF9319_RS05700 (HMPREF9319_1184) - 1185008..1185766 (-) 759 WP_172473475.1 ABC transporter ATP-binding protein -
  HMPREF9319_RS05705 (HMPREF9319_1185) - 1185794..1186714 (-) 921 WP_003065242.1 glycine betaine ABC transporter substrate-binding protein -
  HMPREF9319_RS05710 (HMPREF9319_1186) - 1186704..1187339 (-) 636 WP_003065244.1 ABC transporter permease -
  HMPREF9319_RS05715 (HMPREF9319_1187) - 1187329..1187781 (-) 453 WP_003065246.1 MarR family winged helix-turn-helix transcriptional regulator -
  HMPREF9319_RS05720 (HMPREF9319_1188) - 1187771..1188748 (-) 978 WP_003065248.1 zinc-binding dehydrogenase -
  HMPREF9319_RS05725 (HMPREF9319_1189) rcrQ 1189015..1190787 (-) 1773 WP_003065250.1 ABC transporter ATP-binding protein Regulator
  HMPREF9319_RS05730 (HMPREF9319_1190) rcrP 1190777..1192591 (-) 1815 WP_003065252.1 ABC transporter ATP-binding protein Regulator
  HMPREF9319_RS05735 (HMPREF9319_1191) rcrR 1192595..1193035 (-) 441 WP_003065254.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  HMPREF9319_RS05740 (HMPREF9319_1192) - 1193208..1193618 (-) 411 WP_003065257.1 peptide deformylase -
  HMPREF9319_RS05745 (HMPREF9319_1193) - 1193615..1194124 (-) 510 WP_003065260.1 GNAT family N-acetyltransferase -
  HMPREF9319_RS05750 (HMPREF9319_1194) gdhA 1194401..1195750 (-) 1350 WP_003065263.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 65352.45 Da        Isoelectric Point: 5.1262

>NTDB_id=1111691 HMPREF9319_RS05725 WP_003065250.1 1189015..1190787(-) (rcrQ) [Streptococcus equinus ATCC 700338]
MENKKKTSFYDRMKPYIRGFQLPFLLAVIGAIVSATVTVIGPDKLKEITNTITKGLTPTATGMIPGIDLDKVGKIALTLA
ILYVISAVVGYIQSFTVATIVQRFSQRLRKAIQTKIDKVPLNYFDSHSQGDTLSRVTNDVDLLGQSLNQSLGTLVTSTML
LIGSIFMMFHSNVSMALTAIGSVLIGFVLVMVIMGSSQPLFKRQQNNLAAINGYVEEIYSGHNVVTSYNAAGETSETFKK
LNTNLYKSMWQSQFLSGIMMPLMIFVGNFGYVMVCVVGAVKVINGDITMGDVVAFMTYIRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEDEMEDESDKERQLSDVNGEVTFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGQITIDGVDTRLMTREEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDEQVIAAAKAVGVHHFIMTLPKGYDT
YLDDSVTLSIGQKQLLTIARALLKDSPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDDLMQQGGFYADLYNSQFEVA

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=1111691 HMPREF9319_RS05725 WP_003065250.1 1189015..1190787(-) (rcrQ) [Streptococcus equinus ATCC 700338]
ATGGAAAATAAGAAAAAAACATCTTTCTATGACAGAATGAAGCCCTATATTAGAGGTTTCCAGCTTCCATTTCTTCTTGC
AGTGATTGGAGCAATTGTTTCTGCGACGGTTACGGTTATTGGACCTGATAAATTAAAAGAAATCACCAATACAATCACCA
AAGGTTTGACACCAACGGCGACTGGTATGATTCCAGGAATCGACTTGGATAAAGTTGGTAAAATTGCATTAACTTTGGCA
ATTTTATACGTTATTTCAGCAGTAGTTGGTTATATTCAAAGCTTTACCGTAGCGACTATCGTTCAACGTTTTTCACAACG
TTTACGTAAAGCTATTCAGACCAAAATTGACAAGGTTCCATTGAATTACTTTGATAGTCATTCGCAAGGGGACACCCTTT
CTCGTGTGACAAATGACGTTGACTTGCTTGGTCAATCGCTTAACCAAAGTTTGGGAACTTTGGTGACATCAACCATGTTA
TTGATTGGATCAATTTTCATGATGTTCCATTCAAATGTCAGCATGGCTCTAACAGCGATTGGGTCTGTTCTGATTGGTTT
TGTTTTGGTTATGGTTATCATGGGCTCATCACAACCATTGTTCAAACGTCAACAAAATAACTTGGCTGCGATTAATGGTT
ATGTTGAAGAAATTTACTCTGGTCATAATGTGGTAACAAGTTATAACGCTGCTGGTGAAACAAGCGAAACCTTTAAAAAA
TTAAACACCAATCTTTATAAATCAATGTGGCAATCACAGTTCTTGTCAGGTATTATGATGCCGCTTATGATTTTCGTTGG
GAACTTTGGTTATGTTATGGTCTGTGTGGTTGGTGCCGTTAAAGTTATCAATGGTGATATTACCATGGGGGATGTGGTTG
CCTTTATGACTTATATTCGTATCTTCTCACAACCATTGTCACAAATTGCGCAAGCTTTCACACAAATGCAATCAGCAACA
GCTGCCATGAGCCGTGTCTTTGAATTCCTTGAAGAAGATGAAATGGAAGATGAGTCTGATAAGGAACGTCAACTTAGTGA
TGTTAATGGTGAAGTTACCTTTGATAATGTTTTCTTTGGTTATTCTAAGGATAAAACAATTATCCATGATTTCTCCGCTG
TGGCGAAACCTGGTCAGAAAGTTGCCATTGTTGGACCAACAGGCGCTGGTAAAACAACCATTGTTAACCTGCTCATGAAA
TTCTATGAAATCGATAAAGGTCAAATCACTATTGATGGTGTGGATACACGTTTGATGACACGTGAAGAAGTGCATGACCA
ATTCTCAATGGTGCTTCAAGATACGTGGTTGTTTGAAGGAACAATCAAAGAAAACTTGATTTACAATCAAGAAAATATTA
CAGACGAACAAGTTATTGCAGCGGCTAAGGCTGTTGGTGTTCATCACTTTATCATGACACTTCCAAAAGGTTATGACACT
TATCTTGATGATTCTGTAACACTTTCAATTGGTCAAAAACAACTCTTGACGATTGCGCGTGCTCTTTTGAAAGATTCACC
GCTCCTTATTTTGGACGAAGCAACGTCATCAGTTGATACACGTACTGAAGAATTGATTCAAAAAGCCATGGATAAATTGA
TGGAAGGTCGTACATCATTTGTTATCGCTCACCGTTTGTCAACGATTAGAAACGCTGACCTTATCCTTGTGATGAAAGAT
GGTAACATCATCGAACAAGGCAATCACGATGATTTGATGCAACAAGGCGGATTCTATGCTGACCTCTACAACTCACAATT
TGAAGTAGCTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(370-516)

ABC transporter transmembrane region (ABC_membrane)

(25-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

73.142

100

0.734

Multiple sequence alignment