Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   ACN076_RS10155 Genome accession   NZ_CP184836
Coordinates   2038751..2040715 (-) Length   654 a.a.
NCBI ID   WP_420789932.1    Uniprot ID   -
Organism   Streptococcus sp. K0074     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 2033751..2045715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN076_RS10135 (ACN076_10135) rsmA 2034231..2035103 (-) 873 WP_414322530.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
  ACN076_RS10140 (ACN076_10140) rnmV 2035168..2035734 (-) 567 WP_101786122.1 ribonuclease M5 -
  ACN076_RS10145 (ACN076_10145) - 2035734..2036507 (-) 774 WP_420789930.1 TatD family hydrolase -
  ACN076_RS10150 (ACN076_10150) - 2036664..2038508 (+) 1845 WP_420789931.1 APC family permease -
  ACN076_RS10155 (ACN076_10155) amiA 2038751..2040715 (-) 1965 WP_420789932.1 peptide ABC transporter substrate-binding protein Regulator
  ACN076_RS10160 (ACN076_10160) rpmH 2040853..2040987 (-) 135 WP_000831905.1 50S ribosomal protein L34 -
  ACN076_RS10165 (ACN076_10165) - 2041132..2042346 (-) 1215 WP_261446568.1 pyridoxal phosphate-dependent aminotransferase -
  ACN076_RS10170 (ACN076_10170) - 2042503..2042796 (-) 294 WP_261064245.1 hypothetical protein -
  ACN076_RS10175 (ACN076_10175) - 2042958..2043410 (+) 453 WP_000079148.1 universal stress protein -
  ACN076_RS10180 (ACN076_10180) - 2043445..2044833 (-) 1389 WP_261066323.1 Cof-type HAD-IIB family hydrolase -

Sequence

Protein


Download         Length: 654 a.a.        Molecular weight: 73055.15 Da        Isoelectric Point: 4.7123

>NTDB_id=1111483 ACN076_RS10155 WP_420789932.1 2038751..2040715(-) (amiA) [Streptococcus sp. K0074]
MKKSKVMLFGAMALTAGLALAACGSSQSSNADKTYSYIFVNNPDTLDYITSTRDSTSSITTNLIDGLLENDQYGNLIPSM
AESWTVSKDGLTYTYKIRQGAKWYTSEGEEYADVTAHDFVTGLKYAADKKAENLYLVQDSIKGLADYVEGKSSDFATVGV
KAVDDYTLQYTLNQPETYWNSKTTASILSPVNEAFLKSKGDDFGSVTPSSILSNGPYLFKSFTSKSLIEFDKNPNYWDKD
NVKIEKVKLSFFDGSDQDSIARGFLDGNYTDGRIFPTSSVFAELKKGNEDKITYTPQNSVTFYYLFNVNRQSYKQTMKQS
DKEKTDSRAAMQNKDFRQAINFAFDRHAYAAQTNGEDGADRILRNTVTPSNFVQVGDKNFGDIVNEKIVNYGKDWANIDL
NDGKQAFLNPDKAKEKFAKAKESLQAQGVTFPIHLDMPVDQTAKLDVQQAGSFKQTVEETLGKENVVIDVIQLSPDEKDQ
ATYFADTAEQKDYDIDISGWGGDYSDPKTYLAILDPDTGSQLKNMGLSEGKDKEVKDKIGLADYKKLLDQADAEITDTQA
RYEKYAEAQAWLTDSALFLPVQSGGANPIFRKTVPFTGPFSFVGHKGNADNYKYVELQKEPVTAKQYQELYEKWLKEKAE
SNKKAQEDLANHIQ

Nucleotide


Download         Length: 1965 bp        

>NTDB_id=1111483 ACN076_RS10155 WP_420789932.1 2038751..2040715(-) (amiA) [Streptococcus sp. K0074]
ATGAAGAAATCAAAAGTTATGCTTTTTGGAGCTATGGCTTTGACAGCAGGTCTAGCTCTAGCGGCATGTGGGTCTTCCCA
ATCAAGTAATGCAGACAAGACTTACTCTTATATCTTTGTCAATAACCCAGATACCTTGGATTATATTACCTCTACACGAG
ATTCTACATCTAGTATCACAACCAACTTGATTGATGGTTTGTTGGAAAATGACCAGTATGGCAATCTCATCCCGTCTATG
GCTGAGTCATGGACAGTGTCAAAAGATGGTTTGACCTACACTTATAAAATCCGTCAGGGGGCTAAATGGTACACTTCTGA
AGGAGAAGAGTATGCGGACGTAACAGCTCATGACTTTGTGACTGGTCTCAAGTATGCGGCTGATAAAAAGGCTGAAAACT
TGTACTTGGTACAAGACTCTATCAAGGGGCTAGCAGATTATGTTGAAGGAAAATCATCTGATTTTGCAACTGTTGGTGTT
AAGGCGGTGGACGATTACACGCTACAATACACTCTCAACCAACCTGAGACTTATTGGAACTCTAAAACAACAGCAAGTAT
TCTTAGTCCGGTAAACGAAGCCTTCTTGAAGTCTAAGGGAGATGACTTTGGAAGTGTGACACCATCAAGTATCTTGTCAA
ATGGTCCTTACTTGTTTAAGTCCTTCACATCAAAATCTTTGATTGAGTTTGATAAAAACCCTAACTACTGGGATAAGGAC
AATGTCAAAATCGAGAAAGTGAAACTCTCTTTCTTTGACGGTTCTGACCAAGACAGTATTGCAAGAGGTTTCTTGGATGG
TAACTATACAGATGGTCGTATTTTCCCAACAAGTTCAGTATTTGCTGAACTCAAGAAGGGAAATGAGGACAAGATTACCT
ATACACCGCAGAACTCAGTTACTTTCTATTATCTTTTCAACGTTAATCGTCAAAGTTACAAGCAGACTATGAAACAGTCT
GATAAGGAAAAGACAGATTCACGCGCAGCTATGCAAAATAAAGATTTCCGTCAGGCTATCAACTTTGCCTTTGACCGTCA
TGCTTATGCAGCGCAGACAAATGGTGAAGATGGAGCAGACCGTATCTTGCGTAATACGGTTACACCAAGTAACTTTGTCC
AAGTTGGTGATAAGAACTTCGGTGATATTGTCAATGAAAAAATTGTCAACTACGGTAAAGATTGGGCAAATATCGACTTA
AACGATGGTAAGCAAGCTTTCTTGAATCCTGATAAGGCTAAGGAGAAGTTTGCTAAGGCTAAAGAAAGTCTTCAAGCTCA
GGGAGTAACTTTCCCAATTCATTTGGATATGCCAGTTGACCAGACTGCTAAGTTAGATGTGCAACAGGCCGGTTCTTTCA
AGCAAACAGTGGAAGAAACCCTTGGTAAGGAGAATGTGGTCATCGATGTTATCCAACTATCTCCAGATGAAAAAGATCAA
GCAACCTACTTTGCAGATACAGCAGAGCAAAAAGACTATGACATCGACATCTCAGGATGGGGTGGAGATTACTCAGATCC
TAAAACTTACCTAGCGATCCTTGATCCCGATACAGGTTCTCAGTTGAAAAACATGGGCTTGTCTGAAGGAAAAGACAAGG
AAGTTAAGGACAAGATTGGTCTTGCTGACTATAAGAAACTCTTGGATCAGGCAGACGCAGAAATCACAGATACTCAAGCT
CGCTATGAAAAATATGCTGAAGCCCAAGCTTGGTTGACAGATAGCGCCTTGTTCCTACCAGTTCAAAGTGGCGGAGCCAA
CCCAATCTTCCGTAAGACTGTACCGTTTACAGGACCATTCTCATTCGTTGGTCATAAGGGAAATGCGGACAACTACAAAT
ATGTTGAATTGCAAAAAGAGCCAGTAACTGCTAAACAGTACCAAGAACTCTATGAAAAATGGCTAAAAGAAAAAGCTGAG
TCAAATAAAAAAGCTCAGGAAGATTTAGCTAACCACATTCAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

55.015

100

0.554
  amiA3 Streptococcus thermophilus LMD-9

54.711

100

0.55
  amiA3 Streptococcus thermophilus LMG 18311

54.407

100

0.547

Multiple sequence alignment