Detailed information    

insolico Bioinformatically predicted

Overview


Name   ciaH   Type   Regulator
Locus tag   ACN076_RS07255 Genome accession   NZ_CP184836
Coordinates   1482854..1484188 (-) Length   444 a.a.
NCBI ID   WP_153193329.1    Uniprot ID   -
Organism   Streptococcus sp. K0074     
Function   repress competence development; post-transcriptional repression of CSP production (predicted from homology)   
Competence regulation

Genomic Context


Location: 1477854..1489188
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN076_RS07250 (ACN076_07250) - 1479054..1482596 (-) 3543 WP_420789708.1 pneumococcal-type histidine triad protein -
  ACN076_RS07255 (ACN076_07255) ciaH 1482854..1484188 (-) 1335 WP_153193329.1 two-component system sensor histidine kinase CiaH Regulator
  ACN076_RS07260 (ACN076_07260) ciaR 1484178..1484852 (-) 675 WP_060805708.1 two-component system response regulator CiaR Regulator
  ACN076_RS07265 (ACN076_07265) - 1484961..1487507 (-) 2547 WP_261219218.1 M1 family metallopeptidase -
  ACN076_RS07270 (ACN076_07270) - 1487629..1488069 (-) 441 WP_101782032.1 ASCH domain-containing protein -
  ACN076_RS07275 (ACN076_07275) - 1488029..1488913 (-) 885 WP_261023939.1 putative PEP-binding protein -

Sequence


Protein


Download         Length: 444 a.a.        Molecular weight: 50718.44 Da        Isoelectric Point: 9.1616

>NTDB_id=1111460 ACN076_RS07255 WP_153193329.1 1482854..1484188(-) (ciaH) [Streptococcus sp. K0074]
MFSKLKKTWYADDFSYFIRNFGVFTLIFSTMTLIILQVMHSSLYTSVDDKLHGLSENPQAVIQLAVNRATEEIKDLENAA
TDTSKTEVKPNVSSNTEVILFDKNFTQLLSGNRFLGLDKIKLEKKELGHIYQIQVFNSYGQEEIYRMILMETNISSVSTN
IKYAAILINTSQLEQASQKHEKLIVIVMASFWILSLLASLYLARVSVRPLLESMQKQQSFVENASHELRTPLAVLQNRLE
TLFRKPEATIMDVSESIASSLEEVRNMRFLTTNLLNLARRDDGIKPELAEVPTSFFNTTFTNYEMIASENDRVFRFENRI
HRTIVTDQLLLKQLMTILFDNAVKYTEEDGEIDFLISATDRNLYLLVSDNGVGISTEDKKKIFDRFYRVDKARTRQKGGF
GLGLSLAKQIVDALKGTITVKDNKPKGTIFEVKIAIHTPSKKKK

Nucleotide


Download         Length: 1335 bp        

>NTDB_id=1111460 ACN076_RS07255 WP_153193329.1 1482854..1484188(-) (ciaH) [Streptococcus sp. K0074]
ATGTTCAGTAAACTAAAAAAAACATGGTATGCGGATGACTTTAGTTATTTTATCCGTAACTTTGGTGTCTTCACTCTGAT
TTTCTCCACCATGACTCTGATTATTTTGCAGGTCATGCACTCGAGTCTCTATACTTCGGTGGATGATAAGCTTCATGGAC
TGAGTGAAAATCCTCAGGCAGTTATTCAGCTTGCGGTAAATAGGGCAACTGAAGAGATTAAAGACTTAGAGAATGCCGCT
ACAGATACTAGCAAGACTGAGGTAAAACCCAATGTCAGTTCCAATACGGAGGTTATTCTTTTTGATAAAAATTTTACCCA
ACTCCTTTCTGGAAATCGATTTTTGGGATTGGATAAGATTAAGTTAGAAAAGAAAGAATTAGGCCATATCTACCAGATTC
AGGTTTTTAATAGCTATGGACAGGAAGAAATCTATCGCATGATTTTGATGGAAACGAATATCAGTTCGGTTTCAACCAAT
ATCAAGTATGCAGCTATCTTGATTAATACCAGTCAGTTGGAGCAGGCCAGTCAAAAGCACGAGAAATTGATTGTGATTGT
GATGGCAAGTTTCTGGATTTTATCTTTACTTGCAAGTCTCTATCTAGCTAGGGTCAGTGTTAGGCCCCTGCTTGAGAGCA
TGCAGAAGCAACAGTCCTTTGTGGAAAATGCTAGTCATGAGTTACGAACTCCACTCGCAGTTTTGCAAAATCGCTTAGAG
ACCCTTTTTCGTAAGCCAGAAGCAACCATTATGGATGTGAGCGAAAGCATTGCCTCTAGTTTGGAAGAAGTCCGAAATAT
GCGGTTTTTGACGACGAACTTGTTGAATTTAGCTCGTAGAGATGATGGGATTAAGCCGGAACTTGCAGAAGTTCCAACCA
GTTTTTTCAATACGACTTTCACAAACTATGAAATGATTGCTTCGGAAAATGATCGTGTCTTCCGTTTTGAAAATCGGATT
CATCGAACGATTGTCACAGATCAGCTTCTTTTGAAACAACTGATGACCATCTTATTTGATAATGCTGTCAAGTATACTGA
AGAGGATGGTGAAATTGATTTTCTTATCTCGGCGACTGATCGCAATCTGTATTTACTTGTTTCTGATAATGGAGTCGGTA
TTTCCACAGAAGATAAGAAGAAAATTTTTGATCGCTTTTATCGAGTGGACAAGGCTAGAACCCGCCAAAAAGGTGGTTTT
GGTTTAGGGTTATCCCTAGCCAAGCAAATTGTAGATGCCTTAAAAGGAACCATTACTGTCAAAGATAATAAACCGAAAGG
AACAATCTTTGAAGTGAAGATTGCTATCCACACACCATCTAAAAAGAAAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus pneumoniae Rx1

96.396

100

0.964

  ciaH Streptococcus pneumoniae D39

96.396

100

0.964

  ciaH Streptococcus pneumoniae R6

96.396

100

0.964

  ciaH Streptococcus pneumoniae TIGR4

96.396

100

0.964

  ciaH Streptococcus mutans UA159

55.862

97.973

0.547


Multiple sequence alignment