Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   ACN076_RS02540 Genome accession   NZ_CP184836
Coordinates   495141..495761 (+) Length   206 a.a.
NCBI ID   WP_061088457.1    Uniprot ID   -
Organism   Streptococcus sp. K0074     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 490141..500761
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN076_RS02530 (ACN076_02530) rpoC 490714..494391 (+) 3678 WP_420790067.1 DNA-directed RNA polymerase subunit beta' -
  ACN076_RS02535 (ACN076_02535) ndk 494494..494907 (+) 414 WP_061758889.1 nucleoside-diphosphate kinase -
  ACN076_RS02540 (ACN076_02540) comM 495141..495761 (+) 621 WP_061088457.1 hypothetical protein Regulator
  ACN076_RS02545 (ACN076_02545) tsaE 495846..496289 (+) 444 WP_061088456.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACN076_RS02550 (ACN076_02550) - 496279..496797 (+) 519 WP_000455533.1 GNAT family N-acetyltransferase -
  ACN076_RS02555 (ACN076_02555) brpA 496805..497821 (+) 1017 WP_000239270.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACN076_RS02560 (ACN076_02560) cinA 497907..499163 (+) 1257 WP_420790068.1 competence/damage-inducible protein A Machinery gene
  ACN076_RS02565 (ACN076_02565) recA 499218..500384 (+) 1167 WP_420790069.1 recombinase RecA Machinery gene

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23456.61 Da        Isoelectric Point: 10.1254

>NTDB_id=1111434 ACN076_RS02540 WP_061088457.1 495141..495761(+) (comM) [Streptococcus sp. K0074]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLLYGILLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYMRDFLAILDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIATLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=1111434 ACN076_RS02540 WP_061088457.1 495141..495761(+) (comM) [Streptococcus sp. K0074]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTCTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTTCATAGTGTCCTAGCTAGTAAGAAGTCAGTGAAGCTTCTTTACGGTATCCTGCTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTCCTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTTTTCTTTCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACATGCGCGATTTTC
TTGCTATTCTAGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCTCTTTTGATTTATATTGGACTGGGTTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAAAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGCTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

97.087

100

0.971
  comM Streptococcus pneumoniae R6

97.087

100

0.971
  comM Streptococcus pneumoniae TIGR4

97.087

100

0.971
  comM Streptococcus mitis SK321

38.974

94.66

0.369
  comM Streptococcus mitis NCTC 12261

38.462

94.66

0.364

Multiple sequence alignment