Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ACN076_RS00225 | Genome accession | NZ_CP184836 |
| Coordinates | 36579..37532 (-) | Length | 317 a.a. |
| NCBI ID | WP_420789950.1 | Uniprot ID | - |
| Organism | Streptococcus sp. K0074 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 31579..42532
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACN076_RS00200 (ACN076_00200) | - | 32337..32960 (-) | 624 | WP_420789947.1 | HI_0552 family protein | - |
| ACN076_RS00205 (ACN076_00205) | jag | 33011..34000 (-) | 990 | WP_420789948.1 | RNA-binding cell elongation regulator JAG/EloR | - |
| ACN076_RS00210 (ACN076_00210) | - | 34018..34842 (-) | 825 | WP_420789949.1 | membrane protein insertase YidC | - |
| ACN076_RS00215 (ACN076_00215) | rnpA | 34817..35188 (-) | 372 | WP_000739245.1 | ribonuclease P protein component | - |
| ACN076_RS00220 (ACN076_00220) | - | 35338..36528 (-) | 1191 | WP_049521853.1 | acetate kinase | - |
| ACN076_RS00225 (ACN076_00225) | comYH | 36579..37532 (-) | 954 | WP_420789950.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ACN076_RS00230 (ACN076_00230) | - | 37593..38180 (-) | 588 | WP_194250511.1 | class I SAM-dependent methyltransferase | - |
| ACN076_RS00235 (ACN076_00235) | comGG/cglG | 38213..38626 (-) | 414 | WP_203176437.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACN076_RS00240 (ACN076_00240) | comGF/cglF | 38604..39065 (-) | 462 | WP_061457600.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACN076_RS00245 (ACN076_00245) | comGE/cglE | 39028..39330 (-) | 303 | WP_000413380.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACN076_RS00250 (ACN076_00250) | comGD/cglD | 39293..39727 (-) | 435 | WP_194250512.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACN076_RS00255 (ACN076_00255) | comGC/cglC | 39690..40013 (-) | 324 | WP_000738641.1 | comG operon protein ComGC | Machinery gene |
| ACN076_RS00260 (ACN076_00260) | comGB/cglB | 40015..41058 (-) | 1044 | WP_153193868.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACN076_RS00265 (ACN076_00265) | comGA/cglA/cilD | 40979..41920 (-) | 942 | WP_420789951.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACN076_RS00270 (ACN076_00270) | - | 41997..42362 (-) | 366 | WP_000286413.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35639.80 Da Isoelectric Point: 4.3151
>NTDB_id=1111407 ACN076_RS00225 WP_420789950.1 36579..37532(-) (comYH) [Streptococcus sp. K0074]
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELEQVRENNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLAKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSHEHTYAHHLLMEQGIKYLKSDGYAIFLAPSDLLTSPQ
SDLLKGWLKEEASLTAMISLPENLFANAKQSKTIFILQKKSEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELEQVRENNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLAKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSHEHTYAHHLLMEQGIKYLKSDGYAIFLAPSDLLTSPQ
SDLLKGWLKEEASLTAMISLPENLFANAKQSKTIFILQKKSEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
Nucleotide
Download Length: 954 bp
>NTDB_id=1111407 ACN076_RS00225 WP_420789950.1 36579..37532(-) (comYH) [Streptococcus sp. K0074]
ATGGATTTTGAAAAAATTGAACAAGCTTATACGTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCAACCAA
CTTTTATGACGCTTTGGTGGAGCAAAATAGCATCTATCTGGATGGTGAAACTGAGCTAGAACAGGTCCGAGAGAACAATC
AAGCCCTTAAGCGTCTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCGGATGCTATTGCTTTGCTTTTGGTGTTTATTGTGGAAGAGCTGTTTAA
AGAGGAGGAAATCACTATCCTCGAAATGGGTTCTGGCATGGGAATTCTGGGGGCTACTTTCTTGACCTCGCTTGCTAAAA
AAGTGGATTACTTGGGAATGGAAGTGGATGATTTGCTGATTGATTTGGCGGCTAGTATGGCAGATGTGATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGTGACGTGGTCATTAGCGACTTGCCTGTCGG
TTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGTCACGAACATACTTACGCTCATCACTTGCTCA
TGGAACAAGGGATTAAGTATCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTGAAAGGCTGGTTGAAAGAGGAGGCAAGTCTGACTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCCAAACAATCTAAGACTATTTTTATCTTACAGAAGAAAAGTGAAATAGCAGTTGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAGGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
ATGGATTTTGAAAAAATTGAACAAGCTTATACGTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCAACCAA
CTTTTATGACGCTTTGGTGGAGCAAAATAGCATCTATCTGGATGGTGAAACTGAGCTAGAACAGGTCCGAGAGAACAATC
AAGCCCTTAAGCGTCTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCGGATGCTATTGCTTTGCTTTTGGTGTTTATTGTGGAAGAGCTGTTTAA
AGAGGAGGAAATCACTATCCTCGAAATGGGTTCTGGCATGGGAATTCTGGGGGCTACTTTCTTGACCTCGCTTGCTAAAA
AAGTGGATTACTTGGGAATGGAAGTGGATGATTTGCTGATTGATTTGGCGGCTAGTATGGCAGATGTGATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGTGACGTGGTCATTAGCGACTTGCCTGTCGG
TTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGTCACGAACATACTTACGCTCATCACTTGCTCA
TGGAACAAGGGATTAAGTATCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTGAAAGGCTGGTTGAAAGAGGAGGCAAGTCTGACTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCCAAACAATCTAAGACTATTTTTATCTTACAGAAGAAAAGTGAAATAGCAGTTGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAGGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
54.633 |
98.738 |
0.539 |
| comYH | Streptococcus mutans UA159 |
54.313 |
98.738 |
0.536 |