Detailed information    

insolico Bioinformatically predicted

Overview

Name   comYH   Type   Machinery gene
Locus tag   ACNR93_RS00710 Genome accession   NZ_CP184736
Coordinates   105440..106396 (+) Length   318 a.a.
NCBI ID   WP_033151900.1    Uniprot ID   A0A1G9M3V5
Organism   Streptococcus equinus strain NM-2-29     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 100440..111396
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS00670 (ACNR93_00670) - 101343..101711 (+) 369 WP_021141429.1 DUF1033 family protein -
  ACNR93_RS00675 (ACNR93_00675) comYA 101780..102721 (+) 942 WP_420543665.1 competence type IV pilus ATPase ComGA Machinery gene
  ACNR93_RS00680 (ACNR93_00680) comYB 102645..103688 (+) 1044 WP_420544055.1 competence type IV pilus assembly protein ComGB Machinery gene
  ACNR93_RS00685 (ACNR93_00685) comGC/cglC 103688..103981 (+) 294 WP_033151921.1 competence type IV pilus major pilin ComGC Machinery gene
  ACNR93_RS00690 (ACNR93_00690) comGD 103965..104396 (+) 432 WP_420543666.1 competence type IV pilus minor pilin ComGD -
  ACNR93_RS00695 (ACNR93_00695) comYE 104350..104643 (+) 294 WP_134775786.1 competence type IV pilus minor pilin ComGE Machinery gene
  ACNR93_RS00700 (ACNR93_00700) comYF 104627..105064 (+) 438 WP_003067903.1 competence type IV pilus minor pilin ComGF Machinery gene
  ACNR93_RS00705 (ACNR93_00705) comGG 105051..105386 (+) 336 WP_200769899.1 competence type IV pilus minor pilin ComGG -
  ACNR93_RS00710 (ACNR93_00710) comYH 105440..106396 (+) 957 WP_033151900.1 class I SAM-dependent methyltransferase Machinery gene
  ACNR93_RS00715 (ACNR93_00715) - 106450..107649 (+) 1200 WP_420543667.1 acetate kinase -
  ACNR93_RS00720 (ACNR93_00720) - 107807..108004 (+) 198 WP_021141442.1 helix-turn-helix transcriptional regulator -
  ACNR93_RS00725 (ACNR93_00725) - 108060..108512 (+) 453 WP_074483978.1 ABC transporter permease -
  ACNR93_RS00730 (ACNR93_00730) - 108524..109159 (+) 636 WP_420543668.1 CPBP family intramembrane glutamic endopeptidase -
  ACNR93_RS00735 (ACNR93_00735) proC 109211..109981 (-) 771 WP_045798324.1 pyrroline-5-carboxylate reductase -
  ACNR93_RS00740 (ACNR93_00740) pepA 110043..111110 (-) 1068 WP_024344502.1 glutamyl aminopeptidase -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 35755.80 Da        Isoelectric Point: 4.4780

>NTDB_id=1110925 ACNR93_RS00710 WP_033151900.1 105440..106396(+) (comYH) [Streptococcus equinus strain NM-2-29]
MNFENIETAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGASEAVAANNEKLRQLNLTKEEWRRAFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFVQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEGHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPESIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIDKFKKWNVENMIF

Nucleotide


Download         Length: 957 bp        

>NTDB_id=1110925 ACNR93_RS00710 WP_033151900.1 105440..106396(+) (comYH) [Streptococcus equinus strain NM-2-29]
ATGAATTTTGAAAATATCGAAACAGCCTATGGGTTGATTCTTGAAAATATACAATTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCACTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAGGGTGCCAGTGAAGCTGTAGCTGCAAATAATG
AGAAACTACGCCAACTTAATTTAACTAAGGAAGAATGGCGCCGTGCTTTTCAGTTTATCTTTATTAAAGCTGCGCAAACA
GAAGCTCTTCAGGCAAATCACCAATTTACACCTGATGCTATTGGCTTCATTTTAATGTTCCTCATTGAGAATTTGACAGC
TTCTAAGGAACTTGATGTTTTGGAAATCGGTAGCGGAACAGGTAACCTTGCCCAAACGTTATTGAACAACTCATCTAAAG
ACCTAAACTATCTAGGTATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATCGCTGAAGTTATGGATTCTAAA
GCTCAATTCGTTCAAGAAGATGCTGTACGCCCACAGATTCTTAAGGAAAGTGATGTCATCATCAGTGACCTTCCAGTCGG
ATTCTATCCAAATGATGAAATTGCAAAACGTTACAAAGTAGCTAGCAGTGAAGGGCACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTTAAATATCTCAAAAAAGACGGGATTGCTGTCTTTTTAGCACCAGTTAGTCTTTTGACAAGTAAGCAA
AGTGACCTGTTGAAAGCATGGTTGAAGGATTATGCTGATGTGATTGCTGTAATTACTTTGCCAGAATCTATCTTTGGAAA
TGCAGCCAACGCGAAATCGATTTTTGTTTTGAAAAAACAGGCTGAACATACTCCAGAAACCTTTGTTTATCCACTTGCTG
ACTTGCAAAGTCGAGAAGTATTGACAGACTTCATTGATAAATTTAAAAAATGGAATGTTGAAAATATGATTTTTTAA

Domains

Predicted by InterproScan.

N-6 DNA Methylase (N6_Mtase)

(69-291)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1G9M3V5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comYH Streptococcus mutans UA140

68.987

99.371

0.686
  comYH Streptococcus mutans UA159

68.671

99.371

0.682

Multiple sequence alignment