Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ID09_RS07060 Genome accession   NZ_CP008921
Coordinates   1464076..1464255 (-) Length   59 a.a.
NCBI ID   WP_024390773.1    Uniprot ID   -
Organism   Streptococcus suis 6407     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1459076..1469255
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ID09_RS07035 (ID09_07235) - 1460731..1461105 (+) 375 WP_014638280.1 GntR family transcriptional regulator -
  ID09_RS07040 (ID09_07240) - 1461098..1461805 (+) 708 WP_024381454.1 ABC transporter ATP-binding protein -
  ID09_RS07045 (ID09_07245) - 1461822..1462604 (+) 783 WP_014736047.1 hypothetical protein -
  ID09_RS07050 (ID09_07250) add 1462648..1463649 (-) 1002 WP_024381455.1 adenosine deaminase -
  ID09_RS07060 (ID09_07260) prx 1464076..1464255 (-) 180 WP_024390773.1 hypothetical protein Regulator
  ID09_RS07065 (ID09_07265) - 1464416..1465153 (-) 738 WP_024390772.1 PlySs2 family phage lysin -
  ID09_RS07070 (ID09_07275) - 1465250..1465672 (-) 423 WP_228475159.1 phage holin family protein -
  ID09_RS07075 (ID09_07280) - 1465683..1466024 (-) 342 WP_024390584.1 hypothetical protein -
  ID09_RS07080 (ID09_07285) - 1466027..1466260 (-) 234 WP_024390585.1 hypothetical protein -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6725.69 Da        Isoelectric Point: 3.8954

>NTDB_id=110874 ID09_RS07060 WP_024390773.1 1464076..1464255(-) (prx) [Streptococcus suis 6407]
MTEVQVIFEEAIENGWFGEMVTVVRRDGEIFDFVLPGESVRPWEVVSVEKLADVIGELK

Nucleotide


Download         Length: 180 bp        

>NTDB_id=110874 ID09_RS07060 WP_024390773.1 1464076..1464255(-) (prx) [Streptococcus suis 6407]
ATGACAGAAGTACAAGTAATTTTCGAAGAAGCAATTGAAAACGGGTGGTTTGGCGAAATGGTAACGGTCGTTCGTCGTGA
TGGTGAAATATTCGATTTTGTCTTACCAGGCGAGTCAGTCAGACCTTGGGAAGTGGTAAGCGTGGAGAAGTTAGCGGATG
TGATAGGGGAATTAAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

51.923

88.136

0.458
  prx Streptococcus pyogenes MGAS315

50

88.136

0.441
  prx Streptococcus pyogenes MGAS315

46.154

88.136

0.407
  prx Streptococcus pyogenes MGAS315

42.308

88.136

0.373

Multiple sequence alignment