Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   ACN19N_RS14830 Genome accession   NZ_CP184160
Coordinates   3091706..3092836 (+) Length   376 a.a.
NCBI ID   WP_420001653.1    Uniprot ID   -
Organism   Acinetobacter sp. LF10     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3086706..3097836
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN19N_RS14810 (ACN19N_14810) - 3087244..3089355 (-) 2112 WP_420001652.1 TonB-dependent copper receptor -
  ACN19N_RS14815 (ACN19N_14815) - 3089429..3089839 (-) 411 WP_293746354.1 DUF2946 family protein -
  ACN19N_RS14820 (ACN19N_14820) def 3089890..3090420 (-) 531 WP_269229093.1 peptide deformylase -
  ACN19N_RS14825 (ACN19N_14825) tsaP 3090541..3091692 (+) 1152 WP_293746352.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ACN19N_RS14830 (ACN19N_14830) dprA 3091706..3092836 (+) 1131 WP_420001653.1 DNA-processing protein DprA Machinery gene
  ACN19N_RS14835 (ACN19N_14835) - 3092869..3093438 (+) 570 WP_269229096.1 Sua5/YciO/YrdC/YwlC family protein -
  ACN19N_RS14840 (ACN19N_14840) - 3093830..3094750 (-) 921 WP_269229097.1 DMT family transporter -
  ACN19N_RS14845 (ACN19N_14845) - 3095029..3095802 (+) 774 WP_420001654.1 AraC family transcriptional regulator -
  ACN19N_RS14850 (ACN19N_14850) - 3095921..3096466 (+) 546 WP_420001655.1 glutathione peroxidase -
  ACN19N_RS14855 (ACN19N_14855) - 3096816..3096917 (-) 102 WP_420002403.1 transposase -
  ACN19N_RS14860 (ACN19N_14860) - 3096909..3097261 (-) 353 Protein_2883 hypothetical protein -
  ACN19N_RS14865 (ACN19N_14865) - 3097409..3097828 (-) 420 WP_004665198.1 F0F1 ATP synthase subunit epsilon -

Sequence

Protein


Download         Length: 376 a.a.        Molecular weight: 42268.11 Da        Isoelectric Point: 6.8097

>NTDB_id=1108034 ACN19N_RS14830 WP_420001653.1 3091706..3092836(+) (dprA) [Acinetobacter sp. LF10]
MLNQLSPHHYHTVLVWYLVQHSLSSFKKVRNYFGSCTEAVQTHRLSEWQQLGLHKNHLKRLEEFQTPHGKQQFDHMVQLI
CQHTDFILTPEDIDYPTQLLPYSDHPPILFGQGQAQALLQPQISMVGSRKPSPHGRQVAYDFAYYLSEKGFYISSGLAHG
IDEAAHRGGLAHHRTIAVTGTGLDTVYPSQNIKLAQQITQSGAIVTEFLPTTMPLQQHFPRRNRIVSGLSLGVVVVEAAL
KSGSLITANEAANQGKMVFAIPGHIYSEHHQGCHQLIREGATLVDHPEQVIEDLALPTQWQVQQQISEEPVTITPSLPTH
LIALYQSLDWVGQDLDELSQRHPIPIAELTAQLMELELLGFCIQQGGRYLRCRAIH

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=1108034 ACN19N_RS14830 WP_420001653.1 3091706..3092836(+) (dprA) [Acinetobacter sp. LF10]
ATGTTGAATCAGCTGTCGCCCCATCATTATCATACTGTGTTGGTGTGGTACTTGGTTCAACACTCCCTTTCTAGTTTTAA
AAAAGTTCGAAACTATTTCGGTAGTTGTACGGAAGCAGTCCAAACACATCGCCTTTCTGAATGGCAACAGCTCGGTTTAC
ACAAAAATCATTTAAAACGTCTAGAAGAATTCCAAACCCCACATGGGAAACAGCAATTTGACCACATGGTTCAATTGATT
TGTCAGCATACTGATTTTATTTTAACCCCTGAAGATATCGACTACCCTACTCAACTTTTACCTTATTCAGATCATCCTCC
AATTTTATTTGGTCAAGGTCAAGCTCAAGCATTATTACAACCCCAAATTTCCATGGTTGGCAGTCGTAAACCGAGTCCTC
ACGGGAGACAGGTTGCCTATGATTTTGCCTATTATTTAAGTGAAAAAGGATTTTACATCAGCAGTGGTTTAGCGCATGGA
ATTGATGAAGCAGCCCATCGTGGTGGTTTAGCCCATCATCGAACAATCGCGGTGACAGGAACAGGCTTAGATACTGTTTA
TCCTTCGCAGAACATCAAACTTGCACAACAAATTACTCAATCAGGTGCGATTGTCACCGAATTTCTCCCGACGACAATGC
CTTTGCAACAGCATTTTCCACGTCGTAATCGTATTGTTAGTGGTTTAAGTCTTGGTGTGGTGGTTGTAGAAGCGGCATTA
AAGAGTGGCTCACTCATAACTGCAAATGAGGCAGCAAATCAAGGAAAAATGGTATTTGCTATTCCAGGGCACATTTATAG
TGAGCATCATCAAGGCTGTCATCAATTAATTCGTGAAGGTGCAACCTTGGTCGATCATCCTGAACAAGTCATTGAAGACT
TAGCTTTACCTACACAATGGCAAGTACAACAACAAATTTCCGAAGAACCTGTAACCATCACGCCAAGCTTACCAACACAT
TTGATTGCTCTTTATCAAAGTCTTGACTGGGTTGGACAAGACTTGGATGAACTTTCTCAACGTCATCCAATTCCGATTGC
AGAACTCACAGCCCAATTAATGGAATTAGAATTACTCGGTTTCTGTATACAACAGGGCGGTCGCTATTTACGTTGTCGTG
CAATTCATTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(87-285)

DprA winged helix domain (DprA_WH)

(323-367)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

73.936

100

0.739
  dprA Acinetobacter baumannii strain A118

73.67

100

0.737
  dprA Acinetobacter baylyi ADP1

70.079

100

0.71
  dprA Vibrio cholerae strain A1552

41.246

89.628

0.37

Multiple sequence alignment