Detailed information NTG1107339

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: ACN9KP_RS16975
• Genome accession: NZ_CP183947
• Coordinates: 3439687..3440376 (-)
• Length: 229 a.a.
• NCBI ID: WP_198317760.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Ya-1 isolate Tropical rainforest soil
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3434687..3445376

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN9KP_RS16940 (ACN9KP_16940)	fliW	3434778..3435209 (-)	432	WP_003151399.1	flagellar assembly protein FliW	-
ACN9KP_RS16945 (ACN9KP_16945)	-	3435239..3435808 (-)	570	WP_003151397.1	DUF6470 family protein	-
ACN9KP_RS16950 (ACN9KP_16950)	flgL	3435899..3436816 (-)	918	WP_003151396.1	flagellar hook-associated protein FlgL	-
ACN9KP_RS16955 (ACN9KP_16955)	flgK	3436828..3438345 (-)	1518	WP_003151395.1	flagellar hook-associated protein FlgK	-
ACN9KP_RS16960 (ACN9KP_16960)	-	3438361..3438843 (-)	483	WP_003151394.1	flagellar protein FlgN	-
ACN9KP_RS16965 (ACN9KP_16965)	flgM	3438858..3439124 (-)	267	WP_003151393.1	flagellar biosynthesis anti-sigma factor FlgM	-
ACN9KP_RS16970 (ACN9KP_16970)	-	3439194..3439613 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
ACN9KP_RS16975 (ACN9KP_16975)	comFC	3439687..3440376 (-)	690	WP_198317760.1	phosphoribosyltransferase family protein	Machinery gene
ACN9KP_RS16980 (ACN9KP_16980)	-	3440382..3440666 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
ACN9KP_RS16985 (ACN9KP_16985)	comFA	3440724..3442109 (-)	1386	WP_095318332.1	DEAD/DEAH box helicase	Machinery gene
ACN9KP_RS16990 (ACN9KP_16990)	-	3442217..3443065 (-)	849	WP_003151387.1	DegV family protein	-
ACN9KP_RS16995 (ACN9KP_16995)	degU	3443163..3443852 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACN9KP_RS17000 (ACN9KP_17000)	degS	3443929..3445092 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 25262.97 Da
• Isoelectric Point: 8.2933

>NTDB_id=1107339 ACN9KP_RS16975 WP_198317760.1 3439687..3440376(-) (comFC) [Bacillus velezensis strain Ya-1 isolate Tropical rainforest soil]
MNCLLCDSPISSSLTWRSLFSLAPEQEVCTICSSRFEKIEGPVCSICGRPQESNEKCADCAARESKTEMRFLLRQNRSVY
LYNDAMKDSLARFKFRGDAKIIQAFGRDFAAGFKAAYPSNTHTLIPIPLSGERLAERGFNQSELLASLLGMPVIFPLIRL
NNEKQSKKSKTERLSAEKKFSAAENSAEGMNVILIDDIYTTGATLHQAAEVLLTAGKASSVSSFTLIRS

Nucleotide

• Length: 690 bp

>NTDB_id=1107339 ACN9KP_RS16975 WP_198317760.1 3439687..3440376(-) (comFC) [Bacillus velezensis strain Ya-1 isolate Tropical rainforest soil]
CTGAATTGTTTATTGTGTGACTCACCAATTTCAAGTTCATTGACTTGGAGATCTCTGTTTTCTCTGGCGCCCGAGCAAGA
GGTATGCACCATATGCAGCAGCCGATTCGAAAAAATTGAAGGCCCCGTATGCAGTATATGCGGGAGGCCTCAGGAGTCAA
ATGAAAAATGCGCTGATTGTGCGGCCCGGGAATCAAAAACGGAAATGCGCTTTTTGCTGCGGCAAAACCGTTCGGTATAT
TTGTATAATGATGCGATGAAGGACTCATTAGCCCGGTTTAAATTCAGGGGCGATGCGAAAATCATTCAAGCATTTGGACG
TGACTTTGCTGCCGGCTTTAAAGCGGCATATCCATCAAATACACATACTCTCATCCCTATTCCGCTGAGCGGCGAACGGC
TGGCGGAACGCGGATTCAATCAATCCGAGCTGCTGGCCTCTCTGCTCGGAATGCCCGTCATTTTCCCCCTCATCCGACTG
AACAATGAAAAACAATCCAAAAAGAGCAAAACAGAAAGGCTGTCCGCAGAAAAAAAGTTTTCAGCAGCCGAAAACTCGGC
CGAAGGTATGAACGTCATCTTAATAGACGATATTTATACGACGGGCGCCACACTGCATCAAGCCGCCGAAGTCCTGCTGA
CAGCGGGTAAAGCGTCATCGGTCTCCTCTTTTACTTTAATCAGGAGCTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (2-61)

• Phosphoribosyl transferase domain (Pribosyltran) (144-227)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	60.793	99.127	0.603