Detailed information NTG0110707

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACGHJL_RS07855
• Genome accession: NZ_AP035765
• Coordinates: 1665745..1667964 (+)
• Length: 739 a.a.
• NCBI ID: WP_289717676.1
• Uniprot ID: -
• Organism: Pseudomonas guariconensis strain KNHN1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1660745..1672964

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGHJL_RS07835 (KNHN1_15200)	-	1662604..1663227 (+)	624	WP_043214375.1	glutathione S-transferase	-
ACGHJL_RS07840 (KNHN1_15210)	-	1663368..1664300 (+)	933	WP_070573244.1	ABC transporter ATP-binding protein	-
ACGHJL_RS07845 (KNHN1_15220)	-	1664297..1665076 (+)	780	WP_043214381.1	ABC transporter permease	-
ACGHJL_RS07850 (KNHN1_15230)	-	1664960..1665601 (-)	642	WP_139205743.1	DUF2062 domain-containing protein	-
ACGHJL_RS07855 (KNHN1_15240)	comA	1665745..1667964 (+)	2220	WP_289717676.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACGHJL_RS07860 (KNHN1_15250)	exbB	1668075..1668710 (+)	636	WP_043214385.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ACGHJL_RS07865 (KNHN1_15260)	-	1668707..1669141 (+)	435	WP_043214387.1	biopolymer transporter ExbD	-
ACGHJL_RS07870 (KNHN1_15270)	lpxK	1669141..1670151 (+)	1011	WP_090343775.1	tetraacyldisaccharide 4'-kinase	-
ACGHJL_RS07875 (KNHN1_15280)	-	1670194..1670379 (+)	186	WP_003247142.1	Trm112 family protein	-
ACGHJL_RS07880 (KNHN1_15290)	kdsB	1670376..1671140 (+)	765	WP_070573253.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACGHJL_RS07885 (KNHN1_15300)	-	1671140..1671604 (+)	465	WP_043214393.1	low molecular weight protein-tyrosine-phosphatase	-
ACGHJL_RS07890 (KNHN1_15310)	murB	1671601..1672617 (+)	1017	WP_043214395.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 739 a.a.
• Molecular weight: 79846.75 Da
• Isoelectric Point: 10.6082

>NTDB_id=110707 ACGHJL_RS07855 WP_289717676.1 1665745..1667964(+) (comA) [Pseudomonas guariconensis strain KNHN1]
MRTGMFALALGLLSLRFLPALPSVGAMLTMLLLGVVCLPGRARAVGCFLLGMSWACWSAQNALDDRLESALDGRTVWLEG
RVVGLPALRGQSVRFELAEPTSRRTALPRRLQLNWFEGPQLSAGEYWRLAVTLKRPHGLLNPHGPDWEALFLARRIGAVG
TVKAGQLLAPATNNWRDAVRQRLLAVDAQGREGALAALVLGDGSGLARSEWQALQATGTVHLMVISGQHIGLVAGLVYGL
VAWLARLGLWPQRLPWLPWACALSLVSALGYGGLAGFGVPVQRACLMLAMVLLWRLHFSHLGALLPLLAALCGVLLIEPL
ASLLPGFWLSFAAVAVLVFCFAGRLGGWRPWQAWSRAQWVVAVGLLPALLALGLPISLTAPLANLLAVPWISFAVLPLAL
LGSALLPLGQPGELLLWWAGGLLEILFQQLALLGQWRPAWEPQALTPWAGLLVGLGAALLLLPRGVPLRGLGGVMLMALW
APREPVPQGQVEVLQLDVGQGLAVLLRTRTHSLLYDAGPAKGDMDLGDRVVLPTLRKLGVKHLDLMLISHGHADHAGGAA
AIGRGLPLGRVLAGEPEQLPEALRARRCVSGERWHWDGVDFMLWQWAGGPAGNERSCALLVQAQGERLLLAGDMEAGAER
AWLAATDAPRIDWLQAPHHGSRSSSTEPFIRATSPRGVMISRGRYNSFGHPHPQVVERYRRYGLSVHDTAIEGALRLRLG
THGEVEGLRAQRRFWRQGQ

Nucleotide

• Length: 2220 bp

>NTDB_id=110707 ACGHJL_RS07855 WP_289717676.1 1665745..1667964(+) (comA) [Pseudomonas guariconensis strain KNHN1]
ATGCGCACAGGGATGTTCGCGCTCGCACTCGGGCTGTTGAGCCTGCGTTTTCTGCCTGCATTGCCATCGGTCGGCGCGAT
GCTGACGATGCTGTTGCTCGGCGTGGTTTGTCTTCCTGGCAGAGCCAGGGCTGTAGGTTGCTTTCTCCTCGGAATGAGCT
GGGCCTGTTGGTCGGCGCAAAACGCCTTGGATGATCGTCTGGAATCCGCGTTGGATGGGCGAACCGTGTGGCTGGAGGGG
CGGGTGGTGGGATTGCCCGCACTACGAGGGCAATCCGTGCGCTTCGAGCTTGCGGAGCCTACCTCGCGTCGCACCGCCTT
GCCGCGTCGGCTTCAGTTGAACTGGTTCGAGGGGCCACAACTGAGCGCCGGCGAGTACTGGCGCCTGGCTGTCACGCTCA
AGCGACCCCATGGCCTGCTCAACCCCCATGGTCCCGACTGGGAGGCGCTTTTTCTCGCGCGGCGGATCGGCGCCGTGGGC
ACCGTCAAGGCTGGGCAGTTACTGGCACCCGCCACGAACAACTGGCGCGACGCGGTGCGCCAACGCTTGCTGGCAGTCGA
TGCCCAGGGGCGCGAAGGTGCCCTGGCGGCGCTGGTCCTGGGGGATGGCTCGGGGCTTGCGCGCTCGGAATGGCAGGCGT
TGCAGGCCACCGGTACGGTGCACTTGATGGTGATTTCCGGCCAGCACATCGGCTTGGTGGCCGGGCTGGTCTATGGCTTG
GTGGCGTGGCTGGCGCGCCTGGGCCTGTGGCCCCAGCGTCTGCCATGGTTGCCTTGGGCGTGCGCGCTGAGTCTGGTTTC
AGCGTTGGGGTACGGCGGGCTCGCAGGGTTCGGTGTGCCGGTGCAGCGAGCTTGCCTGATGCTGGCGATGGTCCTGCTCT
GGCGTCTGCACTTCAGTCATCTGGGGGCGCTCCTGCCGTTGCTGGCTGCCCTGTGTGGCGTGCTGCTGATCGAACCGTTG
GCGAGCCTGTTGCCCGGGTTTTGGCTATCGTTCGCCGCAGTCGCCGTTCTGGTGTTCTGCTTTGCCGGGCGCCTCGGCGG
CTGGCGGCCGTGGCAAGCCTGGAGCAGGGCGCAATGGGTGGTCGCGGTGGGCTTGTTGCCGGCCTTGCTGGCGCTGGGTT
TGCCGATCAGCCTGACAGCGCCGCTGGCCAATCTGTTGGCGGTACCCTGGATCAGTTTTGCCGTGTTGCCGTTGGCGCTG
CTGGGCAGTGCGCTGTTGCCGCTGGGCCAGCCCGGTGAGCTGTTGCTGTGGTGGGCAGGCGGGTTGCTGGAAATATTGTT
TCAGCAGTTGGCGCTGTTGGGGCAATGGCGTCCGGCCTGGGAGCCCCAGGCATTGACGCCGTGGGCGGGACTGCTGGTCG
GATTGGGGGCGGCGTTGCTGTTGCTGCCCCGGGGTGTGCCGCTGCGTGGACTGGGGGGCGTGATGCTGATGGCTCTGTGG
GCTCCACGGGAGCCAGTGCCGCAGGGGCAGGTTGAAGTCCTGCAACTGGATGTGGGGCAGGGCCTGGCCGTGCTGCTGCG
AACCCGCACGCACAGCCTGCTTTACGATGCCGGCCCCGCCAAGGGTGACATGGACCTGGGGGACCGGGTGGTGTTGCCGA
CCTTGCGCAAGCTTGGCGTCAAGCACCTGGATCTGATGCTGATCAGTCATGGCCACGCCGATCATGCCGGCGGCGCAGCG
GCCATCGGCCGCGGTCTGCCGCTGGGTAGGGTGCTTGCGGGGGAGCCTGAACAATTACCGGAGGCTTTGCGGGCACGCCG
GTGCGTCAGTGGCGAGCGCTGGCACTGGGATGGGGTGGACTTCATGCTTTGGCAGTGGGCAGGGGGGCCGGCCGGTAACG
AGCGTTCCTGTGCGCTGCTGGTACAGGCCCAGGGCGAGCGGTTGTTACTGGCCGGCGATATGGAGGCTGGTGCCGAGCGG
GCTTGGCTGGCAGCGACCGATGCGCCGCGCATCGACTGGTTGCAGGCGCCGCACCATGGCAGTCGCAGCTCGTCCACCGA
GCCGTTCATCCGCGCTACGTCGCCAAGGGGCGTGATGATTTCCCGGGGGCGTTACAACAGCTTCGGTCATCCGCATCCGC
AGGTCGTGGAGCGTTACCGGCGGTACGGGTTGAGCGTTCATGACACCGCGATCGAAGGCGCTTTGCGCCTACGCCTGGGC
ACCCATGGAGAGGTCGAGGGACTGCGGGCGCAGCGGCGGTTCTGGCGACAGGGGCAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (25-166)

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-675)

• Competence protein (Competence) (198-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.414	97.294	0.568
comA	Ralstonia pseudosolanacearum GMI1000	35.058	100	0.367