Detailed information NTG1106992

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACLKM4_RS12815
• Genome accession: NZ_CP183895
• Coordinates: 2674792..2675850 (-)
• Length: 352 a.a.
• NCBI ID: WP_411687461.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain D1_NDM_tet(X3)
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2669792..2680850

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKM4_RS12790	aroK	2670136..2670678 (-)	543	WP_075167858.1	shikimate kinase AroK	-
ACLKM4_RS12795	pilQ	2670715..2672853 (-)	2139	WP_411687493.1	type IV pilus secretin PilQ	Machinery gene
ACLKM4_RS12800	pilP	2672914..2673441 (-)	528	WP_045795346.1	pilus assembly protein PilP	Machinery gene
ACLKM4_RS12805	pilO	2673441..2674160 (-)	720	WP_411687462.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACLKM4_RS12810	pilN	2674157..2674792 (-)	636	WP_005180516.1	PilN domain-containing protein	Machinery gene
ACLKM4_RS12815	pilM	2674792..2675850 (-)	1059	WP_411687461.1	pilus assembly protein PilM	Machinery gene
ACLKM4_RS12820	ponA	2676022..2678598 (+)	2577	WP_411687460.1	penicillin-binding protein PBP1a	-
ACLKM4_RS12825	-	2678699..2680003 (+)	1305	WP_419867775.1	IS4 family transposase	-
ACLKM4_RS12830	-	2680041..2680844 (-)	804	WP_016658442.1	putative RNA methyltransferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38968.61 Da
• Isoelectric Point: 4.5187

>NTDB_id=1106992 ACLKM4_RS12815 WP_411687461.1 2674792..2675850(-) (pilM) [Acinetobacter indicus strain D1_NDM_tet(X3)]
MRRLYRKPSKGLIGVDISSTSVKLLELSVKNDRYWVESYALVPLPEGSVVEKNILNPEAVGDALERAFNLANTPTTAAAL
AIPTSMVISKTIEMDADMTDDEREVQIRMDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRLENVESRCEAIEL
AGLTPKVADVESFAIENAFKVFADTLPMGVNTIGVLDIGHTMTTLSVLKDDKIIYTREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKSRTLPDDYDVEVLEPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSSKIDIKRIESDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1106992 ACLKM4_RS12815 WP_411687461.1 2674792..2675850(-) (pilM) [Acinetobacter indicus strain D1_NDM_tet(X3)]
GTGCGCAGGTTATATCGTAAACCGAGTAAGGGGTTAATAGGTGTAGATATTAGTTCTACTTCTGTTAAGTTATTGGAGCT
CTCTGTAAAGAATGATCGTTACTGGGTGGAAAGTTACGCCTTGGTACCGCTCCCAGAGGGCAGTGTGGTTGAGAAAAATA
TTCTGAATCCTGAAGCTGTAGGGGATGCGCTCGAGCGTGCCTTTAATTTGGCCAATACACCGACAACAGCTGCCGCTTTA
GCGATTCCAACCTCAATGGTAATTAGCAAGACCATTGAGATGGATGCCGATATGACGGATGACGAACGTGAAGTTCAAAT
CCGGATGGATGCAGAGCAATATATTCCTTTCCCATTAGATGAAGTTAGCCTGGACTTTGAGGTGCTGCCTGATCGTCTGG
CCAATCCAAACCGGGTCAATGTTTTGCTGGTGGCGACACGACTGGAAAATGTCGAGAGTCGCTGTGAAGCGATTGAACTG
GCCGGTTTAACCCCAAAAGTGGCAGATGTCGAAAGCTTTGCCATTGAAAATGCCTTTAAAGTCTTCGCCGATACCTTGCC
GATGGGGGTAAATACCATTGGTGTGTTAGACATTGGTCATACTATGACCACGCTGTCGGTACTCAAAGACGATAAAATTA
TCTATACCCGCGAGCAGGTCTTTGGTGGCAAGCAGCTGACCCAGGAAATCCAGAACCGTTATGGTCTGTCCTTTGAAGAA
GCCGGCCGCGCCAAGAAAAGCCGTACCTTGCCAGATGATTATGATGTTGAAGTGTTGGAGCCATTCCTTGAGGCGGTGGT
GCAGCAGGCGGCACGTTCGCTGCAGTTCTTCTTCTCCTCATCGCAGTTTAATGAAATTGACCATATTCTGCTGGCCGGTG
GGAATGCCAATATTCCAGGCCTGGCCAAGCTACTACAGCAAAAACTGGGTTACCGCGTCACCATTGCCAATCCGTTTTTA
CAGATGGGTTTCTCCTCCAAAATTGATATTAAAAGAATTGAAAGCGATGCCTCTTCATTGATGGTGGCATGTGGCTTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	84.375	100	0.844
comM	Acinetobacter nosocomialis M2	84.375	100	0.844
comM	Acinetobacter baylyi ADP1	78.693	100	0.787
pilM	Legionella pneumophila strain ERS1305867	41.243	100	0.415