Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACAM27_RS03270 Genome accession   NZ_AP031605
Coordinates   735904..736296 (-) Length   130 a.a.
NCBI ID   WP_011787170.1    Uniprot ID   -
Organism   Marinobacter sp. RI1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 730904..741296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM27_RS03250 (MspRI1_06430) - 731846..732745 (-) 900 WP_369612549.1 protein-glutamate O-methyltransferase CheR -
  ACAM27_RS03255 (MspRI1_06440) - 732773..734848 (-) 2076 WP_011787173.1 methyl-accepting chemotaxis protein -
  ACAM27_RS03260 (MspRI1_06450) - 734942..735487 (-) 546 WP_011787172.1 chemotaxis protein CheW -
  ACAM27_RS03265 (MspRI1_06460) pilH 735508..735870 (-) 363 WP_011787171.1 twitching motility response regulator PilH -
  ACAM27_RS03270 (MspRI1_06470) pilG 735904..736296 (-) 393 WP_011787170.1 twitching motility response regulator PilG Regulator
  ACAM27_RS03275 (MspRI1_06490) gshB 736594..737547 (+) 954 WP_011787169.1 glutathione synthase -
  ACAM27_RS03280 (MspRI1_06500) - 737594..738460 (+) 867 WP_222198114.1 energy transducer TonB -
  ACAM27_RS03285 (MspRI1_06510) - 738457..739023 (+) 567 WP_011787167.1 YqgE/AlgH family protein -
  ACAM27_RS03290 (MspRI1_06520) ruvX 739016..739447 (+) 432 WP_011787166.1 Holliday junction resolvase RuvX -
  ACAM27_RS03295 (MspRI1_06530) pyrR 739467..739976 (+) 510 WP_369612550.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACAM27_RS03300 (MspRI1_06540) - 740004..741023 (+) 1020 WP_022991331.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14627.92 Da        Isoelectric Point: 5.2241

>NTDB_id=110605 ACAM27_RS03270 WP_011787170.1 735904..736296(-) (pilG) [Marinobacter sp. RI1]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYMPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=110605 ACAM27_RS03270 WP_011787170.1 735904..736296(-) (pilG) [Marinobacter sp. RI1]
ATGGATGACAACTTCGAGAACCTGAAGATCATGGTGATTGACGACAGCAAGACCATTCGTCGCACCGCGGAAACCCTTCT
TAAAAAGGTTGGCTGTGAGGTTATCACTGCCACAGACGGCTTTGACGCTCTGGCCAAGATTGCCGACTCCCAGCCGGACA
TCATTTTTGTCGATATCATGATGCCCCGCCTGGACGGCTACCAGACCTGCGCACTGATCAAGAACAATTCCTCTTTTAAA
AAGACGCCGGTTATCATGCTTTCGAGCAAGGACGGCCTGTTCGACAAGGCAAAAGGCCGAATCGTAGGCTCGGACCAGTA
TCTGACCAAACCGTTCAGCAAGGATGAGCTGCTTAACACCATCCGCCAATACATGCCTCAGGCGGAACAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.6

96.154

0.746
  vicR Streptococcus mutans UA159

41.803

93.846

0.392
  micA Streptococcus pneumoniae Cp1015

39.669

93.077

0.369
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362

Multiple sequence alignment