Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACM591_RS07560 | Genome accession | NZ_CP183486 |
| Coordinates | 1625173..1625613 (+) | Length | 146 a.a. |
| NCBI ID | WP_349789813.1 | Uniprot ID | - |
| Organism | Staphylococcus sp. Ze2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1620173..1630613
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM591_RS07510 (ACM591_07510) | - | 1620688..1621239 (-) | 552 | WP_225489560.1 | Ltp family lipoprotein | - |
| ACM591_RS07515 (ACM591_07515) | - | 1621289..1621753 (-) | 465 | WP_326010367.1 | ImmA/IrrE family metallo-endopeptidase | - |
| ACM591_RS07520 (ACM591_07520) | - | 1621765..1622094 (-) | 330 | WP_029376916.1 | helix-turn-helix domain-containing protein | - |
| ACM591_RS07525 (ACM591_07525) | - | 1622283..1622525 (+) | 243 | WP_326025205.1 | helix-turn-helix transcriptional regulator | - |
| ACM591_RS07530 (ACM591_07530) | - | 1622696..1623433 (+) | 738 | WP_418354319.1 | phage antirepressor KilAC domain-containing protein | - |
| ACM591_RS07535 (ACM591_07535) | - | 1623555..1623794 (-) | 240 | WP_418354320.1 | hypothetical protein | - |
| ACM591_RS07540 (ACM591_07540) | - | 1623853..1624059 (+) | 207 | WP_418354321.1 | hypothetical protein | - |
| ACM591_RS07545 (ACM591_07545) | - | 1624056..1624235 (+) | 180 | WP_418354322.1 | hypothetical protein | - |
| ACM591_RS07550 (ACM591_07550) | - | 1624300..1624560 (+) | 261 | WP_418354323.1 | hypothetical protein | - |
| ACM591_RS07555 (ACM591_07555) | - | 1624553..1625173 (+) | 621 | WP_418354324.1 | DUF1071 domain-containing protein | - |
| ACM591_RS07560 (ACM591_07560) | ssbA | 1625173..1625613 (+) | 441 | WP_349789813.1 | single-stranded DNA-binding protein | Machinery gene |
| ACM591_RS07565 (ACM591_07565) | - | 1625627..1626295 (+) | 669 | WP_418354325.1 | putative HNHc nuclease | - |
| ACM591_RS07570 (ACM591_07570) | - | 1626292..1626543 (+) | 252 | WP_418354326.1 | helix-turn-helix transcriptional regulator | - |
| ACM591_RS07575 (ACM591_07575) | - | 1626530..1627294 (+) | 765 | WP_418354327.1 | conserved phage C-terminal domain-containing protein | - |
| ACM591_RS07580 (ACM591_07580) | - | 1627305..1628078 (+) | 774 | WP_107540769.1 | ATP-binding protein | - |
| ACM591_RS07585 (ACM591_07585) | - | 1628072..1628233 (+) | 162 | WP_418354328.1 | hypothetical protein | - |
| ACM591_RS07590 (ACM591_07590) | - | 1628234..1628446 (+) | 213 | WP_418354329.1 | hypothetical protein | - |
| ACM591_RS07595 (ACM591_07595) | - | 1628457..1628867 (+) | 411 | WP_418354330.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACM591_RS07600 (ACM591_07600) | - | 1628860..1629069 (+) | 210 | WP_029376930.1 | hypothetical protein | - |
| ACM591_RS07605 (ACM591_07605) | - | 1629083..1629460 (+) | 378 | WP_418354331.1 | hypothetical protein | - |
| ACM591_RS07610 (ACM591_07610) | - | 1629461..1630417 (+) | 957 | WP_418354332.1 | DNA cytosine methyltransferase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 16245.98 Da Isoelectric Point: 5.9035
>NTDB_id=1105875 ACM591_RS07560 WP_349789813.1 1625173..1625613(+) (ssbA) [Staphylococcus sp. Ze2]
MINRVVLVGRLTKDPEFRTTPSGVSIANFTLAVNRTFTNAQGEREADFINVVVFRKQAENVNNYLFKGHLAGVDGRMQSR
SYENNEGKRIFVTEVVADSVQFMEPKSQSKGQSQQQSGQAKSQQSPDKDNPFANGNADIDTDDLPF
MINRVVLVGRLTKDPEFRTTPSGVSIANFTLAVNRTFTNAQGEREADFINVVVFRKQAENVNNYLFKGHLAGVDGRMQSR
SYENNEGKRIFVTEVVADSVQFMEPKSQSKGQSQQQSGQAKSQQSPDKDNPFANGNADIDTDDLPF
Nucleotide
Download Length: 441 bp
>NTDB_id=1105875 ACM591_RS07560 WP_349789813.1 1625173..1625613(+) (ssbA) [Staphylococcus sp. Ze2]
ATGATAAACAGAGTCGTATTAGTAGGTAGATTAACAAAAGACCCAGAATTTAGAACAACACCTAGTGGAGTGAGTATCGC
CAATTTCACTTTAGCTGTTAATAGAACATTCACAAATGCACAAGGCGAGCGTGAAGCAGACTTCATCAATGTAGTTGTTT
TTCGTAAACAAGCAGAAAATGTAAACAACTATTTATTCAAAGGTCATTTAGCTGGTGTTGATGGTCGTATGCAATCACGT
AGTTATGAAAACAATGAAGGTAAACGAATATTCGTTACCGAAGTAGTAGCGGACAGTGTTCAATTCATGGAGCCTAAATC
ACAATCTAAAGGGCAATCTCAACAACAAAGTGGACAAGCTAAGTCACAACAATCACCTGATAAGGATAACCCTTTTGCTA
ACGGTAACGCAGATATAGATACGGACGATCTCCCGTTCTGA
ATGATAAACAGAGTCGTATTAGTAGGTAGATTAACAAAAGACCCAGAATTTAGAACAACACCTAGTGGAGTGAGTATCGC
CAATTTCACTTTAGCTGTTAATAGAACATTCACAAATGCACAAGGCGAGCGTGAAGCAGACTTCATCAATGTAGTTGTTT
TTCGTAAACAAGCAGAAAATGTAAACAACTATTTATTCAAAGGTCATTTAGCTGGTGTTGATGGTCGTATGCAATCACGT
AGTTATGAAAACAATGAAGGTAAACGAATATTCGTTACCGAAGTAGTAGCGGACAGTGTTCAATTCATGGAGCCTAAATC
ACAATCTAAAGGGCAATCTCAACAACAAAGTGGACAAGCTAAGTCACAACAATCACCTGATAAGGATAACCCTTTTGCTA
ACGGTAACGCAGATATAGATACGGACGATCTCCCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.233 |
100 |
0.651 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.765 |
100 |
0.603 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.658 |
76.027 |
0.438 |
| ssb | Neisseria gonorrhoeae MS11 |
32.37 |
100 |
0.384 |