Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACN3VN_RS07690 | Genome accession | NZ_CP183396 |
| Coordinates | 1635690..1636184 (-) | Length | 164 a.a. |
| NCBI ID | WP_004083791.1 | Uniprot ID | Q9PDI7 |
| Organism | Xylella fastidiosa strain CFBP8074 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1630690..1641184
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACN3VN_RS07675 (ACN3VN_07675) | gloA | 1630954..1631481 (+) | 528 | WP_010893902.1 | lactoylglutathione lyase | - |
| ACN3VN_RS07680 (ACN3VN_07680) | - | 1631658..1632854 (-) | 1197 | WP_233337618.1 | cation:proton antiporter | - |
| ACN3VN_RS07685 (ACN3VN_07685) | - | 1633165..1634076 (-) | 912 | WP_010893900.1 | class I SAM-dependent methyltransferase | - |
| ACN3VN_RS07690 (ACN3VN_07690) | ssb | 1635690..1636184 (-) | 495 | WP_004083791.1 | single-stranded DNA-binding protein | Machinery gene |
| ACN3VN_RS07695 (ACN3VN_07695) | - | 1636433..1637431 (+) | 999 | WP_058569172.1 | polyprenyl synthetase family protein | - |
| ACN3VN_RS07700 (ACN3VN_07700) | cyoA | 1637895..1638854 (+) | 960 | WP_058569171.1 | ubiquinol oxidase subunit II | - |
| ACN3VN_RS07705 (ACN3VN_07705) | cyoB | 1638848..1640845 (+) | 1998 | WP_004083794.1 | cytochrome o ubiquinol oxidase subunit I | - |
Sequence
Protein
Download Length: 164 a.a. Molecular weight: 18211.20 Da Isoelectric Point: 5.9575
>NTDB_id=1105517 ACN3VN_RS07690 WP_004083791.1 1635690..1636184(-) (ssb) [Xylella fastidiosa strain CFBP8074]
MARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKEGNTQERTEWHRVKFFGKLGEIAGEYLRKGSQCYIEG
SIRYDKFTGQDGQERYVTEIVADEMQMLGGRSDGGGMGGGGERPQRQTSQRQDYAPRRQARQPSQSPQSSPPPMDDFADD
DIPF
MARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKEGNTQERTEWHRVKFFGKLGEIAGEYLRKGSQCYIEG
SIRYDKFTGQDGQERYVTEIVADEMQMLGGRSDGGGMGGGGERPQRQTSQRQDYAPRRQARQPSQSPQSSPPPMDDFADD
DIPF
Nucleotide
Download Length: 495 bp
>NTDB_id=1105517 ACN3VN_RS07690 WP_004083791.1 1635690..1636184(-) (ssb) [Xylella fastidiosa strain CFBP8074]
ATGGCCCGTGGTATCAATAAAGTCATCCTCGTCGGTAACCTCGGTAACGATCCGGATATCAAATACACCCAAGGTGGTAT
GACGATCACTACCATCAGCTTGGCGACAACCAGTGTGCGTAAGGACAAGGAGGGCAATACCCAGGAGCGGACCGAATGGC
ACAGGGTCAAGTTTTTCGGAAAACTCGGTGAGATTGCCGGGGAATATCTACGTAAGGGATCACAGTGCTATATCGAAGGG
AGCATCCGCTATGACAAGTTCACTGGCCAGGATGGTCAGGAGCGCTATGTTACCGAGATCGTTGCTGATGAGATGCAAAT
GTTGGGTGGCCGTAGCGATGGCGGTGGTATGGGCGGGGGCGGTGAGCGCCCGCAGCGTCAAACATCGCAGCGTCAGGATT
ACGCCCCACGTCGCCAGGCTCGGCAGCCGTCACAGTCGCCGCAATCTTCACCGCCGCCGATGGACGATTTCGCTGATGAC
GATATTCCTTTCTAA
ATGGCCCGTGGTATCAATAAAGTCATCCTCGTCGGTAACCTCGGTAACGATCCGGATATCAAATACACCCAAGGTGGTAT
GACGATCACTACCATCAGCTTGGCGACAACCAGTGTGCGTAAGGACAAGGAGGGCAATACCCAGGAGCGGACCGAATGGC
ACAGGGTCAAGTTTTTCGGAAAACTCGGTGAGATTGCCGGGGAATATCTACGTAAGGGATCACAGTGCTATATCGAAGGG
AGCATCCGCTATGACAAGTTCACTGGCCAGGATGGTCAGGAGCGCTATGTTACCGAGATCGTTGCTGATGAGATGCAAAT
GTTGGGTGGCCGTAGCGATGGCGGTGGTATGGGCGGGGGCGGTGAGCGCCCGCAGCGTCAAACATCGCAGCGTCAGGATT
ACGCCCCACGTCGCCAGGCTCGGCAGCCGTCACAGTCGCCGCAATCTTCACCGCCGCCGATGGACGATTTCGCTGATGAC
GATATTCCTTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
49.153 |
100 |
0.53 |
| ssb | Glaesserella parasuis strain SC1401 |
45.81 |
100 |
0.5 |
| ssb | Neisseria meningitidis MC58 |
41.618 |
100 |
0.439 |
| ssb | Neisseria gonorrhoeae MS11 |
41.04 |
100 |
0.433 |