Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | ACAK33_RS06550 | Genome accession | NZ_AP031588 |
| Coordinates | 1360129..1360611 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046489.1 | Uniprot ID | A0A0J0ZLV7 |
| Organism | Acinetobacter baumannii strain JUNP712 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1355129..1365611
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAK33_RS06540 (JUNP712_1297) | pilX | 1355434..1356252 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ACAK33_RS06545 (JUNP712_1298) | pilY1 | 1356264..1360118 (+) | 3855 | WP_216076437.1 | VWA domain-containing protein | Machinery gene |
| ACAK33_RS06550 (JUNP712_1299) | pilY2 | 1360129..1360611 (+) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| ACAK33_RS06555 (JUNP712_1300) | pilE | 1360608..1361033 (+) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| ACAK33_RS06560 (JUNP712_1301) | rpsP | 1361180..1361431 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACAK33_RS06565 (JUNP712_1302) | rimM | 1361451..1361999 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ACAK33_RS06570 (JUNP712_1303) | trmD | 1362045..1362785 (+) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACAK33_RS06575 (JUNP712_1304) | rplS | 1362993..1363361 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ACAK33_RS06580 (JUNP712_1305) | - | 1363413..1364354 (-) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| ACAK33_RS06585 (JUNP712_1306) | - | 1364469..1365500 (-) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17657.94 Da Isoelectric Point: 8.4737
>NTDB_id=110515 ACAK33_RS06550 WP_001046489.1 1360129..1360611(+) (pilY2) [Acinetobacter baumannii strain JUNP712]
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=110515 ACAK33_RS06550 WP_001046489.1 1360129..1360611(+) (pilY2) [Acinetobacter baumannii strain JUNP712]
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
96.25 |
100 |
0.963 |
| comE | Acinetobacter baylyi ADP1 |
41.86 |
100 |
0.45 |