Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   ACNS8M_RS00715 Genome accession   NZ_CP183239
Coordinates   161257..162486 (-) Length   409 a.a.
NCBI ID   WP_419225018.1    Uniprot ID   -
Organism   Acinetobacter sp. A2     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 156257..167486
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNS8M_RS00685 (ACNS8M_00675) - 156624..157043 (+) 420 WP_168419253.1 F0F1 ATP synthase subunit epsilon -
  ACNS8M_RS00690 (ACNS8M_00680) - 157168..157653 (+) 486 WP_179994473.1 DUF2846 domain-containing protein -
  ACNS8M_RS00695 (ACNS8M_00685) - 157739..158344 (-) 606 WP_419225014.1 hypothetical protein -
  ACNS8M_RS00700 (ACNS8M_00690) - 158507..159052 (-) 546 WP_419225015.1 glutathione peroxidase -
  ACNS8M_RS00705 (ACNS8M_00695) - 159344..160252 (+) 909 WP_419225016.1 DMT family transporter -
  ACNS8M_RS00710 (ACNS8M_00700) - 160644..161213 (-) 570 WP_419225017.1 L-threonylcarbamoyladenylate synthase -
  ACNS8M_RS00715 (ACNS8M_00705) dprA 161257..162486 (-) 1230 WP_419225018.1 DNA-processing protein DprA Machinery gene
  ACNS8M_RS00720 (ACNS8M_00710) tsaP 162507..163664 (-) 1158 WP_419225019.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ACNS8M_RS00725 (ACNS8M_00715) def 163786..164316 (+) 531 WP_154321169.1 peptide deformylase -
  ACNS8M_RS00730 (ACNS8M_00720) - 164424..164858 (+) 435 WP_154321168.1 DUF2946 family protein -
  ACNS8M_RS00735 (ACNS8M_00725) - 164922..166949 (+) 2028 WP_419225020.1 TonB-dependent copper receptor -

Sequence

Protein


Download         Length: 409 a.a.        Molecular weight: 45677.76 Da        Isoelectric Point: 6.6993

>NTDB_id=1104722 ACNS8M_RS00715 WP_419225018.1 161257..162486(-) (dprA) [Acinetobacter sp. A2]
MLNSFTPHQIDYIKLWYLVQHSLSSFYKLEQYFGSVAAAVQPEHLLAWSEVRVHANHQQRAKEYLSQSGQQAFENVLKQL
QQHCDFILTLDDPNYPNQLRPYANKTPILFGQGNAQALLQAQIAIVGSRKASPHGRQVAYDFAYYLSEQGFFINSGLAQG
IDEAAHQGALAHRRTIAVMGTGLDSTYPSAHHTLRQQIVERGGAVITEFLPHTKPLQQNFPRRNRLVSGLSLGVIVAEAS
LNSGSLITAKCAAEQGKLIFAIPGHIYSEFHQGCHQLIREGAILVDHPEQVLEDLALPTQWQYQQQNIDQLSSDSTLPSS
KMNAQTGESNTTIPDTATSPQPIHKIVTQIPEHLLALYHQLDWVGQSIDHLAQQLDLEIAVLTAYLMELELMGLAMQQSG
LYLRCRPHK

Nucleotide


Download         Length: 1230 bp        

>NTDB_id=1104722 ACNS8M_RS00715 WP_419225018.1 161257..162486(-) (dprA) [Acinetobacter sp. A2]
ATGTTGAATTCATTCACCCCACATCAAATTGACTACATTAAGTTGTGGTATTTGGTTCAGCATTCACTGTCGAGTTTTTA
TAAACTAGAACAATATTTTGGTTCCGTGGCTGCCGCAGTGCAGCCCGAACATCTTTTGGCTTGGTCAGAAGTACGTGTAC
ATGCCAACCATCAACAGCGTGCTAAAGAATATCTTAGCCAATCAGGGCAACAGGCCTTTGAAAACGTCTTAAAACAATTA
CAACAGCATTGTGATTTTATCCTGACCTTGGATGATCCCAACTACCCCAACCAATTACGCCCCTATGCAAATAAAACTCC
AATTTTATTTGGCCAAGGCAATGCTCAGGCTTTATTGCAAGCTCAAATCGCAATTGTTGGCAGTCGTAAAGCCAGCCCAC
ACGGACGGCAAGTGGCTTATGATTTTGCCTATTATTTAAGTGAACAAGGTTTCTTTATCAATAGCGGTTTAGCACAAGGT
ATTGATGAGGCTGCACACCAAGGCGCTTTGGCACACCGTCGTACCATTGCAGTCATGGGCACAGGTTTAGACAGCACCTA
CCCGAGCGCCCACCATACACTCCGCCAGCAGATTGTGGAGCGTGGCGGTGCAGTGATTACAGAATTTTTACCTCACACCA
AACCTTTGCAGCAAAATTTTCCACGACGTAATCGGTTAGTGAGTGGATTGAGTCTTGGCGTTATTGTTGCTGAAGCCAGT
TTAAATAGTGGATCACTGATTACCGCTAAATGCGCAGCCGAACAAGGTAAATTAATTTTTGCTATTCCTGGACATATTTA
CAGTGAATTTCATCAGGGTTGCCATCAATTAATTCGTGAAGGTGCAATTTTGGTGGATCATCCTGAACAGGTGCTTGAAG
ATTTGGCATTGCCGACTCAATGGCAATATCAACAACAAAATATTGATCAATTGAGCTCTGACTCAACCTTGCCATCTTCA
AAAATGAATGCTCAAACAGGAGAAAGCAATACAACCATACCTGATACAGCCACCTCGCCACAACCTATCCATAAAATCGT
GACGCAGATTCCTGAGCATTTATTGGCGTTGTATCATCAATTGGATTGGGTCGGACAAAGTATTGACCACTTGGCACAAC
AGCTCGACTTGGAAATTGCCGTACTCACAGCTTATTTAATGGAACTTGAGCTCATGGGCTTAGCAATGCAGCAATCAGGC
CTGTATCTGCGTTGTCGTCCTCACAAATAA

Domains

Predicted by InterproScan.

DprA winged helix domain (DprA_WH)

(357-400)

DNA recombination-mediator protein A (DNA_processg_A)

(87-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

61.33

99.267

0.609
  dprA Acinetobacter baumannii D1279779

61.084

99.267

0.606
  dprA Acinetobacter baylyi ADP1

58.374

99.267

0.579

Multiple sequence alignment