Detailed information NTG1103893

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACNOHD_RS03350
• Genome accession: NZ_CP183060
• Coordinates: 745451..746788 (-)
• Length: 445 a.a.
• NCBI ID: WP_125875634.1
• Uniprot ID: A0A3R8V7V7
• Organism: Stutzerimonas kunmingensis strain L4
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 740451..751788

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNOHD_RS03340 (ACNOHD_03340)	-	742504..744099 (-)	1596	WP_234174635.1	response regulator	-
ACNOHD_RS03345 (ACNOHD_03345)	-	744315..745373 (+)	1059	WP_234174636.1	DUF2333 family protein	-
ACNOHD_RS03350 (ACNOHD_03350)	pilR	745451..746788 (-)	1338	WP_125875634.1	sigma-54-dependent transcriptional regulator	Regulator
ACNOHD_RS03355 (ACNOHD_03355)	pilS	746913..748505 (-)	1593	WP_125875632.1	sensor histidine kinase	Regulator
ACNOHD_RS03360 (ACNOHD_03360)	-	748495..748728 (-)	234	WP_014819063.1	PP0621 family protein	-
ACNOHD_RS03365 (ACNOHD_03365)	-	748845..749834 (-)	990	WP_014819064.1	outer membrane protein assembly factor BamD	-
ACNOHD_RS03370 (ACNOHD_03370)	rluD	750040..751014 (+)	975	WP_014819065.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
ACNOHD_RS03375 (ACNOHD_03375)	pgeF	751011..751745 (+)	735	WP_125875630.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49481.93 Da
• Isoelectric Point: 6.3298

>NTDB_id=1103893 ACNOHD_RS03350 WP_125875634.1 745451..746788(-) (pilR) [Stutzerimonas kunmingensis strain L4]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARECLAREHYDLCLTDMRLPDGSGLELVQYIQQQHPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVGTALRLRAPTAEMPVDSRLLGSSPPMKTLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLAEAM
LRRLAAECGDSSAHLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSPGVSENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=1103893 ACNOHD_RS03350 WP_125875634.1 745451..746788(-) (pilR) [Stutzerimonas kunmingensis strain L4]
ATGACCGCGCGCCAGAAAGCACTGATCATCGATGACGAGCCGGATATCCGCGAACTGCTGGAAATCACTCTTGGCCGCAT
GAAACTCGATACCCGCAGCGCTCGCAATCTCAAGGAAGCGCGCGAATGCCTGGCCCGCGAGCATTACGACCTGTGCCTTA
CCGATATGCGCCTGCCCGATGGCAGCGGCCTGGAGCTGGTGCAATACATTCAGCAACAGCACCCGCAGCTGCCGGTGGCG
ATGATCACTGCATACGGCAGCCTGGATACCGCCATTGGCGCGCTCAAGGCCGGGGCATTCGACTTTCTCACCAAACCGGT
GGACCTCAACCGCTTGCGCGAGCTGGTCGGCACGGCCCTGCGCCTGAGGGCGCCCACAGCGGAAATGCCGGTGGACAGCC
GCCTGCTCGGCAGCTCGCCACCCATGAAGACCCTTCGCAAGCAGATCGGCAAACTCGCCCGCAGCCAGGCGCCGGTTTAT
ATCAGCGGCGAGTCCGGCAGCGGCAAGGAGCTGGTGGCCCGACTGATTCACGAGCAGGGTCCTCGTAGTGAAAAGCCCTT
TGTGCCCGTCAACTGCGGCGCGATCCCGTCGGAACTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCAGTG
GCGCCATCGAGGACAAGCCCGGGCTATTCCAGGCCGCCAATGGCGGCACGCTGTTCCTCGACGAGGTAGCCGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAAGCTGTACGCGCGGTCGGCGGCGCTCAGGAAGTAATGGT
CGATGTGCGCATCCTCTGCGCCACCCACAAGGACCTCGCCAGCGAAGTGGCCGCAGGCCGTTTCCGCCAGGATCTGTATT
ACCGCTTGAATGTCATCGAACTGCGCGTGCCGCCACTGCGCGAGCGTCGCGAAGACATTGGCCTGCTCGCCGAAGCCATG
CTTCGGCGTCTTGCGGCGGAGTGCGGTGACAGCAGCGCTCACCTGCACCCGGATGCTCTGGCCAAGCTGGAAAACTATCG
CTTCCCGGGGAACGTTCGTGAGCTGGAGAACATGCTCGAGCGGGCCTACACACTCTGCGAGGGCGATGAGATCAAGGCGG
GCGATCTACGCTTGGCAGACAGCCCAGGCGTATCGGAGAACGGTGAAGCCAGTCTGGCGCAGATCGACAATCTGGAAGAT
CACTTGGAAGAGATCGAGCGCAAGCTGATCATGCAGGCGCTGGAGGAAACCCGCTGGAACCGCACCGCGGCGGCCCAACG
CCTGGGCCTGACCTTCCGTTCGATGCGTTACCGGTTGAAAAAACTCGGACTGGACTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

• Response regulator receiver domain (Response_reg) (8-116)

3D structure

• AlphaFold DB: A0A3R8V7V7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.811	99.775	0.856
pilR	Acinetobacter baumannii strain A118	50.109	100	0.517
luxO	Vibrio cholerae strain A1552	37.584	100	0.378