Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   ACNFKI_RS16515 Genome accession   NZ_CP182571
Coordinates   3274147..3275079 (-) Length   310 a.a.
NCBI ID   WP_025650217.1    Uniprot ID   -
Organism   Bacillus velezensis strain DY201     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3269147..3280079
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNFKI_RS16480 (ACNFKI_16480) - 3269403..3269879 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  ACNFKI_RS16485 (ACNFKI_16485) - 3269879..3270163 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  ACNFKI_RS16490 (ACNFKI_16490) mnhG 3270147..3270521 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  ACNFKI_RS16495 (ACNFKI_16495) - 3270561..3270944 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  ACNFKI_RS16500 (ACNFKI_16500) comA 3270966..3271610 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  ACNFKI_RS16505 (ACNFKI_16505) comP 3271691..3273994 (-) 2304 WP_003152050.1 sensor histidine kinase Regulator
  ACNFKI_RS16510 (ACNFKI_16510) comX 3274014..3274184 (-) 171 WP_003152048.1 competence pheromone ComX Regulator
  ACNFKI_RS16515 (ACNFKI_16515) comQ 3274147..3275079 (-) 933 WP_025650217.1 class 1 isoprenoid biosynthesis enzyme Regulator
  ACNFKI_RS16520 (ACNFKI_16520) degQ 3275264..3275404 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ACNFKI_RS16525 (ACNFKI_16525) - 3275870..3276211 (+) 342 WP_014305721.1 hypothetical protein -
  ACNFKI_RS16530 (ACNFKI_16530) - 3276218..3277438 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  ACNFKI_RS16535 (ACNFKI_16535) - 3277568..3279034 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  ACNFKI_RS16540 (ACNFKI_16540) - 3279052..3279603 (-) 552 WP_003152033.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 310 a.a.        Molecular weight: 35663.80 Da        Isoelectric Point: 5.4532

>NTDB_id=1102300 ACNFKI_RS16515 WP_025650217.1 3274147..3275079(-) (comQ) [Bacillus velezensis strain DY201]
MKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLTSDIIDDLEDEDNRDAPWM
KIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLEVIKLKCGSLFALANVTGT
LLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQELLRIFSDQKLYSQLRLNKK
EFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEFNKLFFELS

Nucleotide


Download         Length: 933 bp        

>NTDB_id=1102300 ACNFKI_RS16515 WP_025650217.1 3274147..3275079(-) (comQ) [Bacillus velezensis strain DY201]
ATGAAGAGTATAATAGAGCGGAACATATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAA
TTTTTCTCTAGCTGAATCAGCTGTTTTGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTG
CCGCTATTGAAATTCTTACACTTACTTCCGATATAATTGATGACCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATG
AAGATAGATCGTTCACTAGCATTAAGTGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTAC
GAATCCTTTAGTGATTAAGTATGTATTAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAAC
CAGAGACAGAAGATGAATGTTTAGAGGTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACG
CTTTTAGCAACTGGAGAATTCAATAAGTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGA
TTATCATGCTATTTTTAAGGATAATACTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCT
TGTTTAATAAGTCTTCTCAAGAATTGCTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAA
GAGTTTATTCAAAAGCTGTATGATTCTGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGG
AACTGAAGTTGAAAATTTAAATTTAGATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATA
AGAAGGATGATGAAGATGCAGAATTTAATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(41-227)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.246

93.226

0.571


Multiple sequence alignment