Detailed information NTG0110031

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: ABXS88_RS10500
• Genome accession: NZ_AP031572
• Coordinates: 2289745..2291946 (+)
• Length: 733 a.a.
• NCBI ID: WP_353671997.1
• Uniprot ID: -
• Organism: Synechocystis sp. LKSZ1
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2284745..2296946

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXS88_RS10470 (OLK001_20560)	-	2284844..2285518 (+)	675	WP_353671992.1	energy-coupling factor ABC transporter ATP-binding protein	-
ABXS88_RS10475 (OLK001_20570)	rsmG	2285509..2286255 (+)	747	WP_353671993.1	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	-
ABXS88_RS10480 (OLK001_20580)	-	2286262..2286672 (+)	411	Protein_2059	MAPEG family protein	-
ABXS88_RS10485 (OLK001_20590)	pilM	2286819..2287922 (+)	1104	WP_353671994.1	type IV pilus biogenesis protein PilM	Machinery gene
ABXS88_RS10490 (OLK001_20600)	pilN	2287977..2288840 (+)	864	WP_353671995.1	PilN domain-containing protein	Machinery gene
ABXS88_RS10495 (OLK001_20610)	pilO	2288866..2289663 (+)	798	WP_353671996.1	pilus assembly protein	Machinery gene
ABXS88_RS10500 (OLK001_20620)	pilQ	2289745..2291946 (+)	2202	WP_353671997.1	secretin N-terminal domain-containing protein	Machinery gene
ABXS88_RS10505 (OLK001_20630)	-	2291953..2292279 (+)	327	WP_353671998.1	hypothetical protein	-
ABXS88_RS10510 (OLK001_20640)	-	2292264..2292503 (+)	240	WP_353671999.1	hypothetical protein	-
ABXS88_RS10515 (OLK001_20650)	-	2292514..2293290 (+)	777	WP_353672000.1	pentapeptide repeat-containing protein	-
ABXS88_RS10520 (OLK001_20660)	-	2293375..2294418 (+)	1044	WP_353672001.1	glucokinase	-
ABXS88_RS10525 (OLK001_20670)	-	2294415..2294948 (-)	534	WP_353672002.1	R3H domain-containing nucleic acid-binding protein	-
ABXS88_RS10530 (OLK001_20680)	yidC	2295042..2296193 (-)	1152	WP_353672003.1	membrane protein insertase YidC	-
ABXS88_RS10535 (OLK001_20690)	-	2296289..2296684 (-)	396	WP_353672004.1	PH domain-containing protein	-

Sequence

Protein

• Length: 733 a.a.
• Molecular weight: 78002.48 Da
• Isoelectric Point: 4.6562

>NTDB_id=110031 ABXS88_RS10500 WP_353671997.1 2289745..2291946(+) (pilQ) [Synechocystis sp. LKSZ1]
MKNYRYWLTAKVVAGLLIALQPAQAATSEGQPDFKQELEKTDLSTSTDLFTTELPLTTSALEINTESPKINPAPLEVAQV
LPPNQGQPPVLVPNPEVIIKSNNGAPNPDILSPAVPVAPVLPRAVPAPVGDISISNINMNYDVINLGTRGSTMIPRLVLR
QAPVKEVLLVLARYAGMNIIFTDGQTGNSQANQSQQPPAPNAVQPAAQTTISLDLEQETVQQVFNAVLMVSGLKANLRGT
TVFVGPDLPPQAMNLVSRTFRLNQAKASNVASYLALQGAQVNVYQEGSTQRTIDNQGNVTVTRINPQIIPLSIQSSQAAT
PGASTGLTPLSGLLVANDDRINSITLTGEPRQVEIASALITQLDARRRQVAVNVKIVDINLNNIQDYNSSFSFGINDSYF
VQDNGSMVMRFGSTSPVTSANLNSASGRITNPPAIPNPLGPNGDSPGVAFYDPNNVQLIPATIGTQSVLLPFLTSTNLGI
SGNPYTTGITTPPLATIDPTTGLITVTPPEYDVASYFQYPKKFQAQIEAQIRSGNAKILTDPILMVQEGQIASVKLVEQV
VSSVNTQVDPLSGVRTTTPVLSDVGLTLKVNIDKIDDNGFISLSVNPLVSSPAGTQVFRSGDGADNQLTLINTRELSSGL
VRLRDGQTMILSGIISQIDQTVTSKVPVLGDLPLIGALFRSQTDTTDRSEVIVLLTPQIVHDGAESQFGYNFTPGKATAD
YLRSKGFPVQAQP

Nucleotide

• Length: 2202 bp

>NTDB_id=110031 ABXS88_RS10500 WP_353671997.1 2289745..2291946(+) (pilQ) [Synechocystis sp. LKSZ1]
ATGAAAAATTACCGTTATTGGCTGACAGCAAAAGTAGTGGCTGGCTTACTAATCGCCCTCCAACCGGCCCAGGCCGCGAC
CAGCGAAGGCCAACCGGATTTCAAGCAGGAGCTAGAAAAGACAGACCTGAGTACTTCAACTGACCTGTTTACAACGGAGC
TCCCTCTCACCACCTCCGCCCTAGAAATTAATACCGAATCTCCTAAAATTAACCCCGCTCCCTTGGAAGTGGCCCAGGTG
TTACCGCCCAATCAGGGTCAACCGCCGGTACTAGTGCCCAACCCGGAAGTCATTATCAAATCCAATAATGGCGCTCCCAA
CCCTGATATTCTCTCACCAGCGGTTCCTGTCGCCCCCGTTTTACCTCGAGCTGTACCGGCTCCCGTTGGGGATATTTCTA
TATCTAATATTAATATGAACTATGATGTCATTAACCTAGGGACTCGGGGTAGTACCATGATCCCTCGTTTAGTGTTACGT
CAAGCCCCTGTCAAGGAAGTGTTACTCGTCCTGGCCCGCTACGCTGGAATGAATATTATTTTTACGGACGGTCAAACGGG
CAATAGTCAAGCGAATCAAAGCCAACAACCCCCAGCCCCGAATGCCGTCCAGCCCGCGGCCCAAACCACCATTTCTCTCG
ATTTAGAACAGGAAACCGTTCAACAGGTCTTTAATGCAGTCTTGATGGTATCGGGGCTAAAAGCGAATCTGCGGGGCACC
ACCGTCTTTGTTGGCCCTGACCTCCCCCCCCAAGCGATGAACTTGGTGAGCCGAACCTTTCGTTTAAATCAGGCAAAAGC
TTCTAACGTCGCGTCCTATTTGGCCCTGCAGGGAGCACAGGTCAATGTTTACCAAGAAGGTAGTACTCAAAGAACCATCG
ACAACCAAGGCAATGTGACAGTAACGCGAATTAACCCACAAATTATTCCCCTATCTATTCAGTCAAGTCAGGCCGCTACC
CCAGGAGCCTCAACAGGATTAACCCCTTTAAGCGGTTTACTCGTTGCGAACGACGACCGGATTAACAGTATTACGTTGAC
TGGTGAACCCCGCCAGGTCGAAATTGCCTCTGCTCTAATCACCCAGCTCGATGCTCGCCGTCGCCAGGTTGCAGTCAACG
TCAAAATCGTTGATATTAACTTGAATAACATCCAAGACTATAACAGTAGCTTTTCCTTTGGCATTAACGACAGCTATTTT
GTCCAAGATAACGGTTCAATGGTGATGCGTTTTGGTAGTACTTCTCCCGTTACCAGCGCTAACCTTAATAGTGCCTCTGG
CCGAATCACCAATCCTCCCGCTATTCCTAATCCTTTAGGCCCTAATGGAGATTCACCAGGAGTCGCTTTCTATGACCCCA
ATAATGTCCAGCTAATTCCAGCAACGATTGGAACGCAATCAGTTTTACTGCCATTTTTAACTTCTACCAATCTTGGCATA
TCAGGTAATCCTTATACGACTGGTATTACAACACCGCCCTTGGCAACCATTGATCCCACGACCGGCCTTATTACCGTTAC
TCCTCCTGAGTATGATGTTGCCTCCTACTTCCAATATCCTAAGAAATTCCAGGCCCAAATTGAAGCCCAGATTCGTAGCG
GCAATGCCAAAATTCTCACTGATCCCATTCTGATGGTGCAAGAGGGCCAGATTGCCAGTGTTAAATTGGTGGAGCAAGTC
GTTTCTAGCGTTAATACCCAGGTTGATCCCCTGAGCGGTGTCCGTACCACGACCCCTGTCCTCTCAGATGTCGGTTTAAC
CCTTAAAGTCAATATCGACAAAATTGATGACAATGGTTTTATTAGTCTGTCGGTAAACCCTCTGGTTTCTTCTCCGGCTG
GTACTCAAGTGTTCCGTAGTGGTGATGGGGCCGATAACCAACTAACGCTAATTAATACAAGGGAATTAAGCTCTGGCTTA
GTCCGTCTCCGGGATGGTCAAACAATGATTCTCTCCGGGATTATTTCTCAGATTGACCAGACCGTCACCAGCAAGGTACC
GGTTCTAGGCGATTTACCCTTGATCGGGGCCCTGTTCCGGAGCCAGACCGATACCACCGACCGCTCTGAGGTGATTGTTC
TGTTAACGCCGCAGATTGTTCATGATGGTGCTGAGTCCCAATTTGGCTATAACTTCACCCCTGGTAAGGCTACGGCGGAT
TATCTACGGAGCAAAGGCTTCCCGGTTCAAGCCCAGCCGTAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (531-701)

• Bacterial type II/III secretion system short domain (Secretin_N) (258-369)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Synechocystis sp. PCC 6803	52.02	100	0.562