Detailed information NTG0110029

Bioinformatically predicted

Overview

• Name: pilN
• Type: Machinery gene
• Locus tag: ABXS88_RS10490
• Genome accession: NZ_AP031572
• Coordinates: 2287977..2288840 (+)
• Length: 287 a.a.
• NCBI ID: WP_353671995.1
• Uniprot ID: -
• Organism: Synechocystis sp. LKSZ1
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2282977..2293840

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXS88_RS10460 (OLK001_20540)	tsaB	2283207..2283827 (+)	621	WP_353671990.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
ABXS88_RS10465 (OLK001_20550)	-	2283832..2284740 (-)	909	WP_353671991.1	Sll0314/Alr1548 family TPR repeat-containing protein	-
ABXS88_RS10470 (OLK001_20560)	-	2284844..2285518 (+)	675	WP_353671992.1	energy-coupling factor ABC transporter ATP-binding protein	-
ABXS88_RS10475 (OLK001_20570)	rsmG	2285509..2286255 (+)	747	WP_353671993.1	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	-
ABXS88_RS10480 (OLK001_20580)	-	2286262..2286672 (+)	411	Protein_2059	MAPEG family protein	-
ABXS88_RS10485 (OLK001_20590)	pilM	2286819..2287922 (+)	1104	WP_353671994.1	type IV pilus biogenesis protein PilM	Machinery gene
ABXS88_RS10490 (OLK001_20600)	pilN	2287977..2288840 (+)	864	WP_353671995.1	PilN domain-containing protein	Machinery gene
ABXS88_RS10495 (OLK001_20610)	pilO	2288866..2289663 (+)	798	WP_353671996.1	pilus assembly protein	Machinery gene
ABXS88_RS10500 (OLK001_20620)	pilQ	2289745..2291946 (+)	2202	WP_353671997.1	secretin N-terminal domain-containing protein	Machinery gene
ABXS88_RS10505 (OLK001_20630)	-	2291953..2292279 (+)	327	WP_353671998.1	hypothetical protein	-
ABXS88_RS10510 (OLK001_20640)	-	2292264..2292503 (+)	240	WP_353671999.1	hypothetical protein	-
ABXS88_RS10515 (OLK001_20650)	-	2292514..2293290 (+)	777	WP_353672000.1	pentapeptide repeat-containing protein	-

Sequence

Protein

• Length: 287 a.a.
• Molecular weight: 30580.64 Da
• Isoelectric Point: 4.4531

>NTDB_id=110029 ABXS88_RS10490 WP_353671995.1 2287977..2288840(+) (pilN) [Synechocystis sp. LKSZ1]
MYSLDVNFLKDRREDSSKLAATGTTIVSQTKDVKEQIPIYIGAAVLVILPALAGLATLVVGWQQSMTEQNIQELDTELTR
ITAQNKKIQEVNAKAAAIHEEVNGLIGVFDQVKPWSAILQDITDQTPAGVQISNIQQAGQQLTLNGFASNYSALNDFVLT
LQNSQFFKADQTKLLTANEAPFPVVGENTVTEGAPANNPTNQPPGQAKEGEPKPTVVIPQGVKYTVQTQLTDTPDQQLMD
DLIRKGAPGLVARFKLLEETGALKGPTAPAVAPPPAAPADAAPAPNP

Nucleotide

• Length: 864 bp

>NTDB_id=110029 ABXS88_RS10490 WP_353671995.1 2287977..2288840(+) (pilN) [Synechocystis sp. LKSZ1]
ATGTATAGTTTAGACGTTAACTTTCTCAAAGACCGCAGGGAAGACAGTTCCAAGCTGGCAGCCACGGGAACGACGATTGT
TTCCCAGACCAAGGATGTTAAAGAACAAATTCCTATCTATATCGGTGCAGCTGTGCTGGTGATCCTCCCTGCCTTAGCTG
GTTTAGCAACTTTAGTGGTTGGCTGGCAACAAAGCATGACCGAGCAAAACATCCAGGAATTAGATACGGAATTAACTCGT
ATTACTGCCCAAAACAAGAAAATCCAGGAGGTCAATGCCAAAGCGGCAGCTATTCATGAAGAAGTCAATGGCTTGATCGG
CGTATTTGATCAAGTCAAGCCCTGGTCTGCCATCCTGCAAGATATTACCGATCAAACCCCTGCAGGAGTACAGATTAGTA
ATATTCAACAGGCGGGTCAGCAGTTAACGCTCAATGGCTTTGCTAGTAATTATTCTGCTCTAAATGATTTTGTTTTAACC
CTACAAAATTCTCAGTTTTTTAAGGCAGACCAAACTAAGCTTTTGACGGCCAACGAGGCTCCTTTCCCTGTAGTTGGGGA
AAACACCGTAACAGAAGGGGCTCCGGCTAATAATCCCACGAATCAACCCCCTGGCCAAGCGAAAGAGGGGGAACCCAAAC
CGACGGTAGTCATTCCCCAGGGGGTTAAATACACGGTTCAAACCCAGTTAACTGACACTCCTGACCAGCAACTGATGGAT
GACCTGATTCGCAAAGGAGCCCCCGGCCTGGTTGCTCGCTTCAAGCTTCTAGAGGAAACTGGTGCTCTGAAAGGGCCGAC
TGCCCCTGCAGTAGCTCCCCCTCCTGCTGCTCCCGCCGATGCGGCCCCAGCCCCCAATCCCTAA

Domains

Predicted by InterproScan.

• Fimbrial assembly protein (PilN) (PilN) (117-229)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilN	Synechocystis sp. PCC 6803	51.93	99.303	0.516