Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ABXS94_RS00510 | Genome accession | NZ_AP031566 |
| Coordinates | 126057..126632 (+) | Length | 191 a.a. |
| NCBI ID | WP_096902231.1 | Uniprot ID | - |
| Organism | Acinetobacter towneri strain PT23-B2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 121057..131632
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABXS94_RS00495 (PT23B2_00950) | tenA | 122361..123035 (-) | 675 | WP_004970198.1 | thiaminase II | - |
| ABXS94_RS00500 (PT23B2_00960) | - | 123340..124425 (+) | 1086 | WP_004970195.1 | DUF475 domain-containing protein | - |
| ABXS94_RS00505 (PT23B2_00970) | - | 124641..126005 (+) | 1365 | WP_353675372.1 | MFS transporter | - |
| ABXS94_RS00510 (PT23B2_00980) | ssb | 126057..126632 (+) | 576 | WP_096902231.1 | single-stranded DNA-binding protein | Machinery gene |
| ABXS94_RS00515 (PT23B2_00990) | ahpC | 126883..127446 (+) | 564 | WP_004970191.1 | alkyl hydroperoxide reductase subunit C | - |
| ABXS94_RS00520 (PT23B2_01000) | - | 127643..128527 (+) | 885 | WP_353675373.1 | pirin family protein | - |
| ABXS94_RS00525 (PT23B2_01010) | - | 128951..130258 (+) | 1308 | WP_004970183.1 | FAD-dependent oxidoreductase | - |
| ABXS94_RS00530 (PT23B2_01020) | - | 130556..131386 (+) | 831 | WP_004970181.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21036.83 Da Isoelectric Point: 6.4800
>NTDB_id=109980 ABXS94_RS00510 WP_096902231.1 126057..126632(+) (ssb) [Acinetobacter towneri strain PT23-B2]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDSANRGQSDQQDGGFAQPRFNNNQGGYGNQNQAPATGYANQNQGGFNQNQGG
GYANNNPSGFAPKPQAAPATAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDVWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGDQMQMLDSANRGQSDQQDGGFAQPRFNNNQGGYGNQNQAPATGYANQNQGGFNQNQGG
GYANNNPSGFAPKPQAAPATAPADLDDDLPF
Nucleotide
Download Length: 576 bp
>NTDB_id=109980 ABXS94_RS00510 WP_096902231.1 126057..126632(+) (ssb) [Acinetobacter towneri strain PT23-B2]
ATGCGTGGTGTAAATAAAGTCATTTTAGTGGGTACTTTAGGTCGTGATCCTGAAACAAAAACTTTCCCAAATGGGGGTTC
TCTCACTCAATTTTCTATCGCAACCAGTGATGTCTGGACAGACAAAAACACAGGTGAGCGTAAAGAGCAAACAGAGTGGC
ATCGCATTGTTTTACATAACCGTTTAGGCGAGATTGCACAGCAATATTTACGCAAAGGTTCTAAAGTATATATTGAAGGT
TCATTGCGTACGCGTCAGTGGACAGACCAAAATGGTCAAGAGCGTTACACCACTGAAATTCGTGGCGATCAAATGCAAAT
GCTCGACTCTGCTAACCGTGGACAATCTGACCAGCAAGATGGTGGCTTTGCTCAACCACGTTTTAACAATAACCAAGGCG
GTTATGGCAATCAGAACCAAGCTCCAGCCACAGGTTATGCGAATCAAAATCAAGGCGGTTTTAACCAAAATCAGGGTGGT
GGCTATGCCAACAATAACCCAAGTGGTTTTGCACCGAAGCCACAAGCTGCGCCTGCAACCGCACCTGCAGATTTAGATGA
TGATTTGCCGTTTTGA
ATGCGTGGTGTAAATAAAGTCATTTTAGTGGGTACTTTAGGTCGTGATCCTGAAACAAAAACTTTCCCAAATGGGGGTTC
TCTCACTCAATTTTCTATCGCAACCAGTGATGTCTGGACAGACAAAAACACAGGTGAGCGTAAAGAGCAAACAGAGTGGC
ATCGCATTGTTTTACATAACCGTTTAGGCGAGATTGCACAGCAATATTTACGCAAAGGTTCTAAAGTATATATTGAAGGT
TCATTGCGTACGCGTCAGTGGACAGACCAAAATGGTCAAGAGCGTTACACCACTGAAATTCGTGGCGATCAAATGCAAAT
GCTCGACTCTGCTAACCGTGGACAATCTGACCAGCAAGATGGTGGCTTTGCTCAACCACGTTTTAACAATAACCAAGGCG
GTTATGGCAATCAGAACCAAGCTCCAGCCACAGGTTATGCGAATCAAAATCAAGGCGGTTTTAACCAAAATCAGGGTGGT
GGCTATGCCAACAATAACCCAAGTGGTTTTGCACCGAAGCCACAAGCTGCGCCTGCAACCGCACCTGCAGATTTAGATGA
TGATTTGCCGTTTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
53.769 |
100 |
0.56 |
| ssb | Vibrio cholerae strain A1552 |
46.429 |
100 |
0.476 |
| ssb | Neisseria gonorrhoeae MS11 |
40.314 |
100 |
0.403 |
| ssb | Neisseria meningitidis MC58 |
38.542 |
100 |
0.387 |