Detailed information NTG1099464

Bioinformatically predicted

Overview

• Name: comP
• Type: Machinery gene
• Locus tag: ACM67E_RS08650
• Genome accession: NZ_CP181244
• Coordinates: 1850019..1850480 (+)
• Length: 153 a.a.
• NCBI ID: WP_416191051.1
• Uniprot ID: -
• Organism: Neisseria sp. CCUG12390
• Function: DNA binding; DNA uptake; receptor of DNA uptake sequence (DUS) (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1845019..1855480

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM67E_RS08635 (ACM67E_08635)	-	1845978..1847912 (-)	1935	WP_416191048.1	MacB family efflux pump subunit	-
ACM67E_RS08640 (ACM67E_08640)	-	1847997..1849175 (-)	1179	WP_416191049.1	efflux RND transporter periplasmic adaptor subunit	-
ACM67E_RS08645 (ACM67E_08645)	-	1849504..1849950 (+)	447	WP_416191050.1	type IV pilin protein	-
ACM67E_RS08650 (ACM67E_08650)	comP	1850019..1850480 (+)	462	WP_416191051.1	type IV pilin protein	Machinery gene
ACM67E_RS08655 (ACM67E_08655)	-	1850645..1851520 (-)	876	WP_416191052.1	chorismate mutase	-
ACM67E_RS08660 (ACM67E_08660)	-	1851819..1853936 (+)	2118	WP_416191053.1	AsmA family protein	-
ACM67E_RS08665 (ACM67E_08665)	-	1854070..1854561 (+)	492	WP_416191054.1	disulfide bond formation protein B	-
ACM67E_RS08670 (ACM67E_08670)	-	1854582..1855310 (+)	729	WP_416192763.1	IS3 family transposase	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17234.68 Da
• Isoelectric Point: 7.6940

>NTDB_id=1099464 ACM67E_RS08650 WP_416191051.1 1850019..1850480(+) (comP) [Neisseria sp. CCUG12390]
MRFSQYGFSLVQLLIVIAMLGILAAISYPAYQNYTKKADLRAVHAVLMQNAQFMERFYLQAGSFKKTSTTWPDLPVNATD
KFCIRPNNNAKGAHDSKFTLKAVAFDKQHEPRILKVDESLTAFICESSTNSCDDDGTFFKGQSADKECEIYQP

Nucleotide

• Length: 462 bp

>NTDB_id=1099464 ACM67E_RS08650 WP_416191051.1 1850019..1850480(+) (comP) [Neisseria sp. CCUG12390]
ATGCGGTTTTCACAATACGGTTTCTCTTTGGTTCAGCTGTTAATCGTCATCGCCATGCTCGGTATCTTGGCTGCCATCTC
TTATCCGGCTTATCAAAACTACACCAAAAAGGCAGATTTACGCGCTGTCCACGCAGTATTGATGCAAAATGCCCAATTTA
TGGAGCGTTTTTACCTGCAAGCCGGCTCATTCAAAAAGACATCGACCACATGGCCCGACCTCCCCGTCAACGCGACCGAT
AAGTTCTGCATCCGTCCCAATAACAATGCAAAAGGTGCGCACGACAGTAAATTCACCTTGAAAGCAGTCGCTTTCGACAA
GCAGCATGAACCGCGCATTTTGAAAGTCGATGAATCGCTAACGGCTTTTATCTGTGAAAGCTCGACCAATTCTTGCGATG
ACGATGGCACATTCTTCAAAGGCCAAAGTGCAGACAAAGAGTGCGAGATATACCAGCCTTAA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (29-109)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comP	Neisseria meningitidis 8013	52.74	95.425	0.503
comP	Neisseria gonorrhoeae MS11	52.74	95.425	0.503
comP	Neisseria subflava NJ9703	49.315	95.425	0.471