Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACM6AW_RS09965 | Genome accession | NZ_CP181145 |
| Coordinates | 2022563..2023033 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain AG21-0629 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1992245..2044369 | 2022563..2023033 | within | 0 |
Gene organization within MGE regions
Location: 1992245..2044369
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM6AW_RS09750 (ACM6AW_09750) | scn | 1992245..1992595 (-) | 351 | WP_000702262.1 | complement inhibitor SCIN-A | - |
| ACM6AW_RS09755 (ACM6AW_09755) | - | 1993278..1993727 (+) | 450 | WP_031771330.1 | chemotaxis-inhibiting protein CHIPS | - |
| ACM6AW_RS09760 (ACM6AW_09760) | - | 1993822..1994159 (-) | 338 | Protein_1886 | SH3 domain-containing protein | - |
| ACM6AW_RS09765 (ACM6AW_09765) | sak | 1994803..1995294 (-) | 492 | WP_000920042.1 | staphylokinase | - |
| ACM6AW_RS09770 (ACM6AW_09770) | - | 1995485..1996240 (-) | 756 | WP_000861026.1 | CHAP domain-containing protein | - |
| ACM6AW_RS09775 (ACM6AW_09775) | - | 1996252..1996506 (-) | 255 | WP_000611512.1 | phage holin | - |
| ACM6AW_RS09780 (ACM6AW_09780) | - | 1996558..1996665 (+) | 108 | WP_031762631.1 | hypothetical protein | - |
| ACM6AW_RS09785 (ACM6AW_09785) | pepG1 | 1996718..1996852 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| ACM6AW_RS09790 (ACM6AW_09790) | sep | 1997097..1997879 (-) | 783 | WP_000034846.1 | staphylococcal enterotoxin type P | - |
| ACM6AW_RS09795 (ACM6AW_09795) | - | 1998291..1998665 (-) | 375 | WP_000340977.1 | hypothetical protein | - |
| ACM6AW_RS09800 (ACM6AW_09800) | - | 1998721..1999008 (-) | 288 | WP_001262621.1 | hypothetical protein | - |
| ACM6AW_RS09805 (ACM6AW_09805) | - | 1999054..1999206 (-) | 153 | WP_001000058.1 | hypothetical protein | - |
| ACM6AW_RS09810 (ACM6AW_09810) | - | 1999199..2002981 (-) | 3783 | WP_416152728.1 | phage tail spike protein | - |
| ACM6AW_RS09815 (ACM6AW_09815) | - | 2002997..2004481 (-) | 1485 | WP_031771331.1 | phage distal tail protein | - |
| ACM6AW_RS09820 (ACM6AW_09820) | - | 2004478..2009007 (-) | 4530 | WP_000504568.1 | phage tail tape measure protein | - |
| ACM6AW_RS09825 (ACM6AW_09825) | gpGT | 2009064..2009201 (-) | 138 | WP_001549167.1 | phage tail assembly chaperone GT | - |
| ACM6AW_RS09830 (ACM6AW_09830) | gpG | 2009252..2009602 (-) | 351 | WP_001096355.1 | phage tail assembly chaperone G | - |
| ACM6AW_RS09835 (ACM6AW_09835) | - | 2009652..2009882 (-) | 231 | Protein_1901 | Ig-like domain-containing protein | - |
| ACM6AW_RS09840 (ACM6AW_09840) | - | 2009918..2010562 (-) | 645 | WP_126787897.1 | major tail protein | - |
| ACM6AW_RS09845 (ACM6AW_09845) | - | 2010563..2010970 (-) | 408 | WP_000565498.1 | hypothetical protein | - |
| ACM6AW_RS09850 (ACM6AW_09850) | - | 2010967..2011371 (-) | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| ACM6AW_RS09855 (ACM6AW_09855) | - | 2011368..2011730 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| ACM6AW_RS09860 (ACM6AW_09860) | - | 2011714..2011998 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| ACM6AW_RS09865 (ACM6AW_09865) | - | 2011988..2012272 (-) | 285 | WP_000238236.1 | hypothetical protein | - |
| ACM6AW_RS09870 (ACM6AW_09870) | - | 2012292..2013437 (-) | 1146 | WP_000154559.1 | phage major capsid protein | - |
| ACM6AW_RS09875 (ACM6AW_09875) | - | 2013461..2014198 (-) | 738 | WP_416152729.1 | head maturation protease, ClpP-related | - |
| ACM6AW_RS09880 (ACM6AW_09880) | - | 2014182..2015369 (-) | 1188 | WP_000025274.1 | phage portal protein | - |
| ACM6AW_RS09885 (ACM6AW_09885) | - | 2015385..2017046 (-) | 1662 | WP_000625088.1 | terminase large subunit | - |
| ACM6AW_RS09890 (ACM6AW_09890) | - | 2017043..2017387 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| ACM6AW_RS09895 (ACM6AW_09895) | - | 2017517..2017816 (-) | 300 | WP_000988332.1 | HNH endonuclease | - |
| ACM6AW_RS09900 (ACM6AW_09900) | - | 2018048..2018464 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| ACM6AW_RS09905 (ACM6AW_09905) | - | 2018492..2018692 (-) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| ACM6AW_RS09910 (ACM6AW_09910) | rinB | 2018692..2018841 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| ACM6AW_RS09915 (ACM6AW_09915) | - | 2018838..2019044 (-) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| ACM6AW_RS09920 (ACM6AW_09920) | - | 2019041..2019286 (-) | 246 | WP_001282077.1 | hypothetical protein | - |
| ACM6AW_RS09925 (ACM6AW_09925) | - | 2019323..2019859 (-) | 537 | WP_000185693.1 | dUTPase | - |
| ACM6AW_RS09930 (ACM6AW_09930) | - | 2019856..2020101 (-) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| ACM6AW_RS09935 (ACM6AW_09935) | - | 2020116..2020358 (-) | 243 | WP_000221877.1 | SAV1978 family virulence-associated passenger protein | - |
| ACM6AW_RS09940 (ACM6AW_09940) | - | 2020361..2020618 (-) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| ACM6AW_RS09945 (ACM6AW_09945) | - | 2020618..2020989 (-) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACM6AW_RS09950 (ACM6AW_09950) | - | 2021002..2021406 (-) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACM6AW_RS09955 (ACM6AW_09955) | - | 2021415..2021633 (-) | 219 | WP_000338528.1 | hypothetical protein | - |
| ACM6AW_RS09960 (ACM6AW_09960) | - | 2021640..2022533 (-) | 894 | WP_000148333.1 | DnaD domain protein | - |
| ACM6AW_RS09965 (ACM6AW_09965) | ssbA | 2022563..2023033 (-) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| ACM6AW_RS09970 (ACM6AW_09970) | - | 2023034..2023651 (-) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| ACM6AW_RS09975 (ACM6AW_09975) | - | 2023732..2024652 (-) | 921 | WP_000180600.1 | recombinase RecT | - |
| ACM6AW_RS09980 (ACM6AW_09980) | - | 2024654..2026597 (-) | 1944 | WP_000700554.1 | AAA family ATPase | - |
| ACM6AW_RS09985 (ACM6AW_09985) | - | 2026606..2026869 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACM6AW_RS09990 (ACM6AW_09990) | - | 2026878..2027138 (-) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| ACM6AW_RS09995 (ACM6AW_09995) | - | 2027143..2027445 (-) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| ACM6AW_RS10000 (ACM6AW_10000) | - | 2027540..2027701 (-) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| ACM6AW_RS10005 (ACM6AW_10005) | - | 2027698..2028021 (-) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| ACM6AW_RS10010 (ACM6AW_10010) | - | 2028076..2028456 (+) | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| ACM6AW_RS10015 (ACM6AW_10015) | - | 2028443..2028640 (-) | 198 | WP_001148856.1 | hypothetical protein | - |
| ACM6AW_RS10020 (ACM6AW_10020) | - | 2028656..2029000 (-) | 345 | WP_078377265.1 | phage antirepressor KilAC domain-containing protein | - |
| ACM6AW_RS10025 (ACM6AW_10025) | - | 2029009..2029404 (-) | 396 | WP_169535470.1 | antA/AntB antirepressor family protein | - |
| ACM6AW_RS10030 (ACM6AW_10030) | - | 2029455..2029784 (+) | 330 | WP_000128909.1 | hypothetical protein | - |
| ACM6AW_RS10035 (ACM6AW_10035) | - | 2029773..2029988 (-) | 216 | WP_001025404.1 | Thoeris anti-defense Tad2 family protein | - |
| ACM6AW_RS10040 (ACM6AW_10040) | - | 2030004..2030267 (-) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| ACM6AW_RS10045 (ACM6AW_10045) | - | 2030264..2030438 (-) | 175 | Protein_1943 | transcriptional regulator | - |
| ACM6AW_RS10050 (ACM6AW_10050) | - | 2030401..2031114 (+) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| ACM6AW_RS10055 (ACM6AW_10055) | - | 2031130..2032062 (+) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| ACM6AW_RS10060 (ACM6AW_10060) | - | 2032068..2032409 (+) | 342 | WP_000591749.1 | hypothetical protein | - |
| ACM6AW_RS10065 (ACM6AW_10065) | - | 2032613..2032795 (+) | 183 | WP_000694772.1 | hypothetical protein | - |
| ACM6AW_RS10070 (ACM6AW_10070) | - | 2032895..2033878 (+) | 984 | WP_001558608.1 | glycosyltransferase family 2 protein | - |
| ACM6AW_RS10075 (ACM6AW_10075) | - | 2033889..2034131 (+) | 243 | WP_000427213.1 | hypothetical protein | - |
| ACM6AW_RS10080 (ACM6AW_10080) | - | 2034194..2035231 (+) | 1038 | WP_000857180.1 | tyrosine-type recombinase/integrase | - |
| ACM6AW_RS10085 (ACM6AW_10085) | sph | 2035288..2036112 (+) | 825 | Protein_1951 | sphingomyelin phosphodiesterase | - |
| ACM6AW_RS10090 (ACM6AW_10090) | lukG | 2036350..2037366 (-) | 1017 | WP_000595392.1 | bi-component leukocidin LukGH subunit G | - |
| ACM6AW_RS10095 (ACM6AW_10095) | lukH | 2037388..2038443 (-) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| ACM6AW_RS10100 (ACM6AW_10100) | - | 2038879..2040102 (+) | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| ACM6AW_RS10105 (ACM6AW_10105) | - | 2040546..2041853 (+) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| ACM6AW_RS10110 (ACM6AW_10110) | groL | 2042393..2044009 (-) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| ACM6AW_RS10115 (ACM6AW_10115) | groES | 2044085..2044369 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=1099058 ACM6AW_RS09965 WP_000934759.1 2022563..2023033(-) (ssbA) [Staphylococcus aureus strain AG21-0629]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1099058 ACM6AW_RS09965 WP_000934759.1 2022563..2023033(-) (ssbA) [Staphylococcus aureus strain AG21-0629]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |