Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACM6AB_RS10445 | Genome accession | NZ_CP181140 |
| Coordinates | 2091008..2091478 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain AG21-0599 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2062027..2115546 | 2091008..2091478 | within | 0 |
Gene organization within MGE regions
Location: 2062027..2115546
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM6AB_RS10235 (ACM6AB_10235) | scn | 2062027..2062377 (-) | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| ACM6AB_RS10240 (ACM6AB_10240) | - | 2063062..2063511 (+) | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| ACM6AB_RS10245 (ACM6AB_10245) | - | 2063606..2063944 (-) | 339 | Protein_1983 | SH3 domain-containing protein | - |
| ACM6AB_RS10250 (ACM6AB_10250) | sak | 2064591..2065082 (-) | 492 | WP_000919350.1 | staphylokinase | - |
| ACM6AB_RS10255 (ACM6AB_10255) | - | 2065273..2066028 (-) | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| ACM6AB_RS10260 (ACM6AB_10260) | - | 2066040..2066294 (-) | 255 | WP_000611512.1 | phage holin | - |
| ACM6AB_RS10265 (ACM6AB_10265) | - | 2066346..2066453 (+) | 108 | WP_001791821.1 | hypothetical protein | - |
| ACM6AB_RS10270 (ACM6AB_10270) | pepG1 | 2066506..2066640 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| ACM6AB_RS10275 (ACM6AB_10275) | - | 2066832..2067128 (-) | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| ACM6AB_RS10280 (ACM6AB_10280) | - | 2067186..2067473 (-) | 288 | WP_001040261.1 | hypothetical protein | - |
| ACM6AB_RS10285 (ACM6AB_10285) | - | 2067520..2067672 (-) | 153 | WP_001153681.1 | hypothetical protein | - |
| ACM6AB_RS10290 (ACM6AB_10290) | - | 2067662..2071447 (-) | 3786 | WP_000582154.1 | phage tail spike protein | - |
| ACM6AB_RS10295 (ACM6AB_10295) | - | 2071463..2072947 (-) | 1485 | WP_000567396.1 | phage distal tail protein | - |
| ACM6AB_RS10300 (ACM6AB_10300) | - | 2072944..2077476 (-) | 4533 | WP_001557459.1 | phage tail tape measure protein | - |
| ACM6AB_RS10305 (ACM6AB_10305) | gpGT | 2077533..2077670 (-) | 138 | WP_001549167.1 | phage tail assembly chaperone GT | - |
| ACM6AB_RS10310 (ACM6AB_10310) | gpG | 2077721..2078071 (-) | 351 | WP_001096355.1 | phage tail assembly chaperone G | - |
| ACM6AB_RS10315 (ACM6AB_10315) | - | 2078121..2078351 (-) | 231 | Protein_1997 | Ig-like domain-containing protein | - |
| ACM6AB_RS10320 (ACM6AB_10320) | - | 2078387..2079031 (-) | 645 | WP_000985142.1 | major tail protein | - |
| ACM6AB_RS10325 (ACM6AB_10325) | - | 2079032..2079439 (-) | 408 | WP_000565498.1 | hypothetical protein | - |
| ACM6AB_RS10330 (ACM6AB_10330) | - | 2079436..2079840 (-) | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| ACM6AB_RS10335 (ACM6AB_10335) | - | 2079837..2080199 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| ACM6AB_RS10340 (ACM6AB_10340) | - | 2080183..2080467 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| ACM6AB_RS10345 (ACM6AB_10345) | - | 2080457..2080741 (-) | 285 | WP_000238241.1 | hypothetical protein | - |
| ACM6AB_RS10350 (ACM6AB_10350) | - | 2080761..2081906 (-) | 1146 | WP_000154568.1 | phage major capsid protein | - |
| ACM6AB_RS10355 (ACM6AB_10355) | - | 2081929..2082666 (-) | 738 | WP_000861911.1 | head maturation protease, ClpP-related | - |
| ACM6AB_RS10360 (ACM6AB_10360) | - | 2082650..2083813 (-) | 1164 | WP_000025268.1 | phage portal protein | - |
| ACM6AB_RS10365 (ACM6AB_10365) | - | 2083829..2085490 (-) | 1662 | WP_000625096.1 | terminase large subunit | - |
| ACM6AB_RS10370 (ACM6AB_10370) | - | 2085487..2085831 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| ACM6AB_RS10375 (ACM6AB_10375) | - | 2085962..2086261 (-) | 300 | WP_000988332.1 | HNH endonuclease | - |
| ACM6AB_RS10380 (ACM6AB_10380) | - | 2086493..2086909 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| ACM6AB_RS10385 (ACM6AB_10385) | - | 2086937..2087137 (-) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| ACM6AB_RS10390 (ACM6AB_10390) | rinB | 2087137..2087286 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| ACM6AB_RS10395 (ACM6AB_10395) | - | 2087283..2087489 (-) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| ACM6AB_RS10400 (ACM6AB_10400) | - | 2087486..2087731 (-) | 246 | WP_001282077.1 | hypothetical protein | - |
| ACM6AB_RS10405 (ACM6AB_10405) | - | 2087768..2088304 (-) | 537 | WP_000185693.1 | dUTPase | - |
| ACM6AB_RS10410 (ACM6AB_10410) | - | 2088301..2088546 (-) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| ACM6AB_RS10415 (ACM6AB_10415) | - | 2088561..2088803 (-) | 243 | WP_000221877.1 | SAV1978 family virulence-associated passenger protein | - |
| ACM6AB_RS10420 (ACM6AB_10420) | - | 2088806..2089063 (-) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| ACM6AB_RS10425 (ACM6AB_10425) | - | 2089063..2089434 (-) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACM6AB_RS10430 (ACM6AB_10430) | - | 2089447..2089851 (-) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACM6AB_RS10435 (ACM6AB_10435) | - | 2089860..2090078 (-) | 219 | WP_000338528.1 | hypothetical protein | - |
| ACM6AB_RS10440 (ACM6AB_10440) | - | 2090085..2090978 (-) | 894 | WP_000148333.1 | DnaD domain protein | - |
| ACM6AB_RS10445 (ACM6AB_10445) | ssbA | 2091008..2091478 (-) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| ACM6AB_RS10450 (ACM6AB_10450) | - | 2091479..2092096 (-) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| ACM6AB_RS10455 (ACM6AB_10455) | - | 2092177..2093097 (-) | 921 | WP_000180600.1 | recombinase RecT | - |
| ACM6AB_RS10460 (ACM6AB_10460) | - | 2093099..2095042 (-) | 1944 | WP_000700554.1 | AAA family ATPase | - |
| ACM6AB_RS10465 (ACM6AB_10465) | - | 2095051..2095314 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACM6AB_RS10470 (ACM6AB_10470) | - | 2095323..2095583 (-) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| ACM6AB_RS10475 (ACM6AB_10475) | - | 2095588..2095890 (-) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| ACM6AB_RS10480 (ACM6AB_10480) | - | 2095985..2096146 (-) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| ACM6AB_RS10485 (ACM6AB_10485) | - | 2096143..2096466 (-) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| ACM6AB_RS10490 (ACM6AB_10490) | - | 2096521..2096901 (+) | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| ACM6AB_RS10495 (ACM6AB_10495) | - | 2096888..2097085 (-) | 198 | WP_001148862.1 | hypothetical protein | - |
| ACM6AB_RS10500 (ACM6AB_10500) | - | 2097101..2097850 (-) | 750 | WP_001148338.1 | phage antirepressor KilAC domain-containing protein | - |
| ACM6AB_RS10505 (ACM6AB_10505) | - | 2097907..2098116 (+) | 210 | WP_000772137.1 | hypothetical protein | - |
| ACM6AB_RS10510 (ACM6AB_10510) | - | 2098109..2098249 (-) | 141 | WP_000939495.1 | hypothetical protein | - |
| ACM6AB_RS10515 (ACM6AB_10515) | - | 2098264..2098707 (-) | 444 | WP_000435360.1 | hypothetical protein | - |
| ACM6AB_RS10520 (ACM6AB_10520) | - | 2098720..2098962 (-) | 243 | WP_000639923.1 | DUF739 family protein | - |
| ACM6AB_RS10525 (ACM6AB_10525) | - | 2099126..2099842 (+) | 717 | WP_001083975.1 | LexA family transcriptional regulator | - |
| ACM6AB_RS10530 (ACM6AB_10530) | - | 2099854..2100708 (+) | 855 | WP_001557601.1 | HIRAN domain-containing protein | - |
| ACM6AB_RS10535 (ACM6AB_10535) | - | 2100782..2100928 (+) | 147 | WP_000345949.1 | hypothetical protein | - |
| ACM6AB_RS10540 (ACM6AB_10540) | - | 2100925..2101110 (+) | 186 | WP_000109189.1 | hypothetical protein | - |
| ACM6AB_RS10545 (ACM6AB_10545) | - | 2101181..2101363 (+) | 183 | WP_000705245.1 | hypothetical protein | - |
| ACM6AB_RS10550 (ACM6AB_10550) | - | 2101442..2102155 (+) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| ACM6AB_RS10555 (ACM6AB_10555) | - | 2102346..2103383 (+) | 1038 | WP_000857200.1 | tyrosine-type recombinase/integrase | - |
| ACM6AB_RS10560 (ACM6AB_10560) | sph | 2103440..2104264 (+) | 825 | Protein_2046 | sphingomyelin phosphodiesterase | - |
| ACM6AB_RS10565 (ACM6AB_10565) | lukG | 2104502..2105518 (-) | 1017 | WP_000595392.1 | bi-component leukocidin LukGH subunit G | - |
| ACM6AB_RS10570 (ACM6AB_10570) | lukH | 2105540..2106595 (-) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| ACM6AB_RS10575 (ACM6AB_10575) | - | 2107031..2108254 (+) | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| ACM6AB_RS10580 (ACM6AB_10580) | - | 2108698..2110005 (+) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| ACM6AB_RS10585 (ACM6AB_10585) | groL | 2110545..2112161 (-) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| ACM6AB_RS10590 (ACM6AB_10590) | groES | 2112237..2112521 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| ACM6AB_RS10595 (ACM6AB_10595) | mroQ | 2112696..2113439 (+) | 744 | WP_000197635.1 | CPBP family intramembrane glutamic endopeptidase MroQ | - |
| ACM6AB_RS10600 (ACM6AB_10600) | - | 2113464..2114723 (-) | 1260 | WP_000120297.1 | SdrH family protein | - |
| ACM6AB_RS10605 (ACM6AB_10605) | - | 2114920..2115546 (+) | 627 | WP_000522381.1 | nitroreductase family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=1098970 ACM6AB_RS10445 WP_000934759.1 2091008..2091478(-) (ssbA) [Staphylococcus aureus strain AG21-0599]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1098970 ACM6AB_RS10445 WP_000934759.1 2091008..2091478(-) (ssbA) [Staphylococcus aureus strain AG21-0599]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |